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ZIRC
ZFIN ID: ZDB-GENE-040426-1385
Gene Name: ELF1 homolog, elongation factor 1
Gene Symbol: elof1
Sequence Ontology ID : SO:0001217

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Previous Name: zgc:64163

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(Including Attributions)
Location: Chr: 3 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have RNA polymerase II complex binding activity. Predicted to be involved in chromatin-mediated maintenance of transcription and transcription elongation from RNA polymerase II promoter.  ...
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:64163]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa11344 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH elof1 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH elof1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process chromatin-mediated maintenance of transcription (more)
    Cellular Component nucleus (more)
    Molecular Function metal ion binding (more)
    GO Terms (all 6)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR007808 (1)
  • InterPro:IPR038567 (1)
  • Pfam:PF05129 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA elof1-201 (1) 1232
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM elof1 No data available
    MARKER RELATIONSHIPS
    elof1 Contained in: [BAC] CH73-346M18 (1) (order this)
    elof1 Encodes: [EST] wz2063
    [cDNA] MGC:64163 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_200386 (1) 1255 bp
    Genomic GenBank:CU571395 (1) 107841 bp
    Select Tool
    Polypeptide UniProtKB:Q7T319 (1) 83 aa
    Sequence Clusters UniGene:76445 (1)
    Sequence Information (all 13)
    ORTHOLOGY for elof1 ( Chr: 3 )
    CITATIONS (17)