ZFIN ID: ZDB-GENE-040426-1242
Gene Name: hippocalcin-like 1
Gene Symbol: hpcal1    Nomenclature History

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Previous Name: zgc:63695

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 20 Mapping Details/Browsers
Description: Predicted to have calcium ion binding activity. Orthologous to human HPCAL1 (hippocalcin like 1).
Genome Resources: Alliance (1),  Gene:394139 (1),  Ensembl(GRCz11):ENSDARG00000022763 (2)
GENE EXPRESSION
High Throughput Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la028244Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa6126 Point Mutation Unknown Splice Site ENU
    sa23737 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa43474 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH hpcal1 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH hpcal1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Cellular Component cellular_component (more)
    Molecular Function calcium ion binding (more)
    GO Terms (all 2)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA hpcal1-202 (1)    Ensembl 1791
    hpcal1-203 (1)    Ensembl 638
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM hpcal1 No data available
    MARKER RELATIONSHIPS
    hpcal1 Contained in: [BAC] CH211-219I10 (1), DKEY-181F18 (1) (order this), DKEY-185L3 (1) (order this)
    hpcal1 Encodes: [cDNA] MGC:63695 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_201164 (1) 1493 nt
    Genomic GenBank:BX000361 (1) 124183 nt
    Select Tool
    Polypeptide UniProtKB:Q7SXX4 (1) 193 aa
    Sequence Information (all 13)
    ORTHOLOGY for hpcal1 ( Chr: 20 )
    CITATIONS (21)