header logo image header logo text
Downloads Login
Research
General Information
ZIRC
ZFIN ID: ZDB-GENE-040426-1241
Gene Name: solute carrier family 33 member 1
Gene Symbol: slc33a1
Sequence Ontology ID : SO:0000704

{{control.fieldName}} Edit

ID: {{control.nomenID}}
{{control.fieldName}}:
Reason:
Comments:

Attributions

{{pub.zdbID}}
Previous Name: zgc:63693

Add new Alias

Alias
Attribution

Attributions for Alias: {{control.newAlias}}

{{pub.zdbID}}

Delete Alias:

(Including Attributions)
Location: Chr: 18 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have solute:proton symporter activity. Involved in central nervous system neuron axonogenesis and negative regulation of BMP signaling pathway. Predicted to localize to the integral  ...
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:63693]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa36689 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    DISEASE ASSOCIATED WITH slc33a1 HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    hereditary spastic paraplegia 42 Spastic paraplegia 42, autosomal dominant 612539
    Congenital cataracts, hearing loss, and neurodegeneration 614482
    DISEASE ASSOCIATED WITH slc33a1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process central nervous system neuron axonogenesis (more)
    Cellular Component integral component of membrane (more)
    Molecular Function acetyl-CoA transmembrane transporter activity (more)
    GO Terms (all 7)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR004752 (1)
  • InterPro:IPR024371 (1)
  • InterPro:IPR036259 (1)
  • Pfam:PF13000 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA slc33a1-002 (1) 466
    slc33a1-201 (1) 1834
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM slc33a1 No data available
    MARKER RELATIONSHIPS
    slc33a1Contained in: [BAC] CH73-5K23 (1) (order this)
    slc33a1Encodes: [cDNA] MGC:63693 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_201108 (1) 1873bp
    Genomic GenBank:CU570794 (1) 111313bp
    Select Tool
    Polypeptide UniProtKB:Q7SXX6 (1) 543aa
    Sequence Clusters UniGene:86986 (1)
    Sequence Information (all 16)
    ORTHOLOGY for slc33a1 (Chr: 18)
    CITATIONS (20)