ZFIN ID: ZDB-GENE-040426-1057
Gene Name: Yip1 domain family, member 5
Gene Symbol: yipf5    Nomenclature History

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Previous Names: zgc:56513 (1), zgc:77939 (1)

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 21 Mapping Details/Browsers
Description: Predicted to be involved in protein transport and vesicle-mediated transport. Predicted to localize to several cellular components, including Golgi apparatus; endoplasmic reticulum; and endoplasmic reticulum membrane. Orthologous to human YIPF5 (Yip1 domain family member 5).
Genome Resources: Alliance (1),  Gene:393265 (1),  Ensembl(GRCz11):ENSDARG00000007279 (2)
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:56513]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
High Throughput Expression: GEO (1) Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa37374 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH yipf5 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH yipf5 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process protein transport (more)
    Cellular Component endoplasmic reticulum (more)
    Molecular Function molecular_function (more)
    GO Terms (all 8)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA yipf5-201 (1)    Ensembl 1430
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM yipf5 No data available
    MARKER RELATIONSHIPS
    yipf5 Contained in: [BAC] DKEY-83D6 (1) (order this)
    yipf5 Contains: [STS] chunp30670
    yipf5 Encodes: [cDNA] MGC:56513 (1), MGC:77939
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_200295 (1)
    Genomic GenBank:CU302322 (1) 218024 nt Blast at MegaBLAST
    Polypeptide UniProtKB:Q6P5I8 (1) 257 aa
    Sequence Information (all 15)
    ORTHOLOGY for yipf5 ( Chr: 21 )
    CITATIONS (23)