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General Information
ZIRC
ZFIN ID: ZDB-GENE-040426-1009
Gene Name: general transcription factor IIIC, polypeptide 6, alpha
Gene Symbol: gtf3c6
Sequence Ontology ID : SO:0001217

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Previous Name: zgc:56388

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(Including Attributions)
Location: Chr: 16 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to be involved in transcription by RNA polymerase III. Predicted to localize to the transcription factor TFIIIC complex. Orthologous to human GTF3C6 (general transcription factor IIIC  ...
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:56388]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa36090 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH gtf3c6 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH gtf3c6 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process transcription by RNA polymerase III (more)
    Cellular Component transcription factor TFIIIC complex (more)
    GO Terms (all 2)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR019481 (1)
  • Pfam:PF10419 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA gtf3c6-201 (1) 903
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM gtf3c6 No data available
    MARKER RELATIONSHIPS
    gtf3c6 Contained in: [BAC] DKEY-91I17 (1) (order this)
    gtf3c6 Encodes: [cDNA] MGC:56388 (1) (order this), MGC:174081 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_200262 (1) 935 bp
    Genomic GenBank:CR936322 (1) 238710 bp Blast at MegaBLAST
    Polypeptide UniProtKB:A8KBS8 (1) 183 aa
    Sequence Clusters UniGene:162210 (1)
    Sequence Information (all 15)
    ORTHOLOGY for gtf3c6 ( Chr: 16 )
    CITATIONS (16)