ZFIN ID: ZDB-GENE-040401-1
Gene Name: POU class 4 homeobox 2
Gene Symbol: pou4f2
Sequence Ontology ID : SO:0000704

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Previous Names: brn-3b (1), brn3.2, brn3b (1)

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(Including Attributions)
Location: Chr: 1 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have DNA-binding activity transcription factor activity and sequence-specific DNA binding activity; involved in brain development and heart development; predicted to localize to the  ...
GENE EXPRESSION
All Expression Data: 7 figures from 5 publications
Wild-type Stages, Structures: Segmentation:14-19 somites (16.0h-19.0h) to Adult (90d-730d, breeding adult)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
zko674a Indel Unknown Unknown CRISPR
  • China Zebrafish Resource Center (CZRC, ZKO consortium) (order this)
  • Targeting reagents:
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH pou4f2 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH pou4f2 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process heart development (more)
    Cellular Component nucleus (more)
    Molecular Function DNA binding (more)
    GO Terms (all 7)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000327 (1)
  • InterPro:IPR001356 (1)
  • InterPro:IPR001387 (1)
  • InterPro:IPR009057 (1)
  • InterPro:IPR010982 (1)
  • InterPro:IPR013847 (1)
  • InterPro:IPR017970 (1)
  • PROSITE:PS00027 (1)
  • PROSITE:PS00035 (1)
  • PROSITE:PS00465 (1)
  • PROSITE:PS50071 (1)
  • PROSITE:PS51179 (1)
  • Pfam:PF00046 (1)
  • Pfam:PF00157 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA pou4f2-201 (1) 3063
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM pou4f2 No data available
    MARKER RELATIONSHIPS
    pou4f2Contained in: [BAC] CH211-163G19 (1) (order this)
    pou4f2Encodes: [cDNA] MGC:193926 (1) (order this), MGC:193958 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_212807 (1) 1493bp
    Genomic GenBank:BX649371 (1) 151254bp
    Select Tool
    Polypeptide UniProtKB:Q6XZH1 (1) 384aa
    Sequence Clusters UniGene:83621 (1)
    Sequence Information (all 25)
    OTHER pou4f2 GENE PAGES
  • Alliance (1)
  • Gene:402816 (1)
  • VEGA:OTTDARG00000019577 (1)
  • Ensembl(GRCz11):ENSDARG00000069737 (2)
  • ORTHOLOGY for pou4f2 (Chr: 1)
    CITATIONS (28)