ZFIN ID: ZDB-GENE-040308-1
Gene Name: tnf receptor-associated factor 4a
Gene Symbol: traf4a
Sequence Ontology ID : SO:0000704

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Previous Name: traf4l

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(Including Attributions)
Location: Chr: 15 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have thioesterase binding activity, tumor necrosis factor receptor binding activity, and ubiquitin protein ligase binding activity; predicted to be involved in positive regulation of JNK  ...
GENE EXPRESSION
All Expression Data: 11 figures from 3 publications
Directly Submitted Expression Data: 6 figures (20 images) from Thisse et al., 2005 [eu286]
Wild-type Stages, Structures: Segmentation:1-4 somites (10.33h-11.66h) to Hatching:Long-pec (48.0h-60.0h)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Targeting reagents:
PHENOTYPE No data available
DISEASE ASSOCIATED WITH traf4a HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH traf4a VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process activation of NF-kappaB-inducing kinase activity (more)
Molecular Function metal ion binding (more)
GO Terms (all 6)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001293 (1)
  • InterPro:IPR001841 (1)
  • InterPro:IPR002083 (1)
  • InterPro:IPR008974 (1)
  • InterPro:IPR012227 (1)
  • InterPro:IPR013083 (1)
  • InterPro:IPR017907 (1)
  • InterPro:IPR027138 (1)
  • InterPro:IPR037307 (1)
  • PROSITE:PS00518 (1)
  • PROSITE:PS50089 (1)
  • PROSITE:PS50144 (1)
  • PROSITE:PS50145 (1)
  • Pfam:PF00917 (1)
  • Pfam:PF02176 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA traf4a-201 (1) 3072
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM traf4a No data available
    MARKER RELATIONSHIPS
    traf4aContained in: [BAC] CH211-187B9 (1) (order this), DKEY-81N5 (1) (order this)
    traf4aEncodes: [EST] eu286 (1)
    [cDNA] MGC:77418 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_205762 (1) 3090bp
    Genomic GenBank:CR392353 (1) 183599bp
    Select Tool
    Polypeptide UniProtKB:Q7T1K2 (1) 470aa
    Sequence Clusters UniGene:81750 (1)
    Sequence Information (all 15)
    OTHER traf4a GENE PAGES
  • Alliance (1)
  • Gene:404045 (1)
  • VEGA:OTTDARG00000035815 (1)
  • ORTHOLOGY for traf4a (Chr: 15)
    CITATIONS (23)