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Gene

trim71

ID
ZDB-GENE-040128-1
Name
tripartite motif containing 71, E3 ubiquitin protein ligase
Symbol
trim71 Nomenclature History
Previous Names
  • lin-41 (1)
  • lin41 (1)
  • cb205 (1)
  • fb93a12
  • sb:cb205
  • wu:fb93a12
Type
protein_coding_gene
Location
Chr: 16 Mapping Details/Browsers
Description
Predicted to enable miRNA binding activity; translation repressor activity; and ubiquitin protein ligase activity. Acts upstream of or within embryonic body morphogenesis. Predicted to be located in P-body. Is expressed in several structures, including nervous system; neural tube; pectoral fin musculature; polster; and solid lens vesicle. Orthologous to human TRIM71 (tripartite motif containing 71).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
8 figures from 2 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
1 Figure from Lin et al., 2007
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With trim71 Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
Hydrocephalus, congenital communicating, 1 618667
Associated With trim71 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Conserved_site IPR017907 Zinc finger, RING-type, conserved site
Domain IPR000315 B-box-type zinc finger
Domain IPR001841 Zinc finger, RING-type
Homologous_superfamily IPR011042 Six-bladed beta-propeller, TolB-like
Homologous_superfamily IPR013083 Zinc finger, RING/FYVE/PHD-type
Homologous_superfamily IPR013783 Immunoglobulin-like fold
Homologous_superfamily IPR014756 Immunoglobulin E-set
Repeat IPR001258 NHL repeat
Repeat IPR001298 Filamin/ABP280 repeat
Repeat IPR013017 NHL repeat, subgroup
Repeat IPR017868 Filamin/ABP280 repeat-like
Domain Details Per Protein
Protein Length B-box-type zinc finger Filamin/ABP280 repeat Filamin/ABP280 repeat-like Immunoglobulin E-set Immunoglobulin-like fold NHL repeat NHL repeat, subgroup Six-bladed beta-propeller, TolB-like Zinc finger, RING/FYVE/PHD-type Zinc finger, RING-type Zinc finger, RING-type, conserved site
UniProtKB:E7FAM5 824
Transcripts
Genome Browsers
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations