ZFIN ID: ZDB-GENE-040116-8
Gene Name: growth factor independent 1A transcription repressor b
Gene Symbol: gfi1ab
Sequence Ontology ID : SO:0000704

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Previous Names: gfi1.2, gfi1, gfi1b

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(Including Attributions)
Location: Chr: 6 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have DNA binding activity and DNA-binding activity transcription factor activity; involved in peripheral nervous system development; predicted to localize to the nucleus; orthologous to  ...
GENE EXPRESSION
All Expression Data: 30 figures from 17 publications
Wild-type Stages, Structures: Segmentation:5-9 somites (11.66h-14.0h) to Adult (90d-730d, breeding adult)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa38552 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa40706 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH gfi1ab HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    ?Neutropenia, nonimmune chronic idiopathic, of adults 607847
    ?Neutropenia, nonimmune chronic idiopathic, of adults 607847
    ?Neutropenia, severe congenital 2, autosomal dominant 613107
    ?Neutropenia, severe congenital 2, autosomal dominant 613107
    DISEASE ASSOCIATED WITH gfi1ab VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process peripheral nervous system development (more)
    Molecular Function metal ion binding (more)
    GO Terms (all 6)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR013087 (1)
  • InterPro:IPR029840 (1)
  • InterPro:IPR036236 (1)
  • PROSITE:PS00028 (1)
  • PROSITE:PS50157 (1)
  • Pfam:PF00096 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA gfi1ab-201 (1) 1228
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM gfi1ab No data available
    MARKER RELATIONSHIPS
    gfi1abContained in: [BAC] DKEY-11H2 (1) (order this)
    gfi1abEncodes: [cDNA] MGC:194663 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_201338 (1) 1191bp
    Genomic GenBank:BX004878 (1) 254657bp Blast at MegaBLAST
    Polypeptide UniProtKB:F1QKD4 (1) 396aa
    Sequence Clusters UniGene:89476 (1)
    Sequence Information (all 13)
    OTHER gfi1ab GENE PAGES
  • Alliance (1)
  • Gene:798697 (1)
  • VEGA:OTTDARG00000019805 (1)
  • ORTHOLOGY for gfi1ab (Chr: 6)
    CITATIONS (41)