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ZIRC
ZFIN ID: ZDB-GENE-040116-5
Gene Name: FA complementation group D2
Gene Symbol: fancd2
Sequence Ontology ID : SO:0001217

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(Including Attributions)
Location: Chr: 6 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have DNA polymerase binding activity. Involved in negative regulation of apoptotic process. Predicted to localize to the condensed chromosome and nucleus. Human ortholog(s) of this gene  ...
GENE EXPRESSION
All Expression Data: 3 figures from 2 publications
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Adult (90d-730d, breeding adult)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
hg46 Small Deletion Unknown Unknown CRISPR
hg47 Small Deletion Exon 16 Unknown CRISPR
la025577Tg Transgenic Insertion Unknown Unknown DNA
sa7045 Point Mutation Unknown Splice Site ENU
sa9077 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa18469 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa20788 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa20789 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa20790 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    DISEASE ASSOCIATED WITH fancd2 HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    Fanconi anemia complementation group D2 Fanconi anemia, complementation group D2 227646
    DISEASE ASSOCIATED WITH fancd2 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process negative regulation of apoptotic process (more)
    Cellular Component condensed chromosome (more)
    Molecular Function DNA polymerase binding (more)
    GO Terms (all 5)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR016024 (1)
  • InterPro:IPR029448 (1)
  • Pfam:PF14631 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA fancd2-201 (1) 4762
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM fancd2 No data available
    MARKER RELATIONSHIPS
    fancd2 Contained in: [BAC] DKEY-178O3 (1) (order this)
    fancd2 Encodes: [cDNA] MGC:193568 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_201341 (1) 4791 bp
    Genomic GenBank:BX957236 (1) 211391 bp Blast at MegaBLAST
    Polypeptide UniProtKB:B3DJT4 (1) 1445 aa
    Sequence Clusters UniGene:87637 (1)
    Sequence Information (all 18)
    ORTHOLOGY for fancd2 ( Chr: 6 )
    CITATIONS (26)