ZFIN ID: ZDB-GENE-031222-3
Gene Name: solute carrier family 13 member 1
Gene Symbol: slc13a1
Sequence Ontology ID : SO:0000704

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Previous Name: sb:cb1073 (1)

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(Including Attributions)
Location: Chr: 25 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Exhibits sodium:sulfate symporter activity; involved in sodium ion transport and sulfate transport; predicted to localize to the integral component of membrane; orthologous to human SLC13A1 (solute  ...
GENE EXPRESSION
All Expression Data: 14 figures from 5 publications
Directly Submitted Expression Data: 2 figures (7 images) from Thisse et al., 2001 [cb1073]
Wild-type Stages, Structures: Pharyngula:Prim-5 (24.0h-30.0h) to Adult (90d-730d, breeding adult)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa32538 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa45856 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH slc13a1 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH slc13a1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process sodium ion transport (more)
    Cellular Component integral component of membrane (more)
    Molecular Function sodium:sulfate symporter activity (more)
    GO Terms (all 7)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001898 (1)
  • Pfam:PF00939 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA slc13a1-201 (1) 2571
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM slc13a1 No data available
    MARKER RELATIONSHIPS
    slc13a1Contained in: [BAC] CH211-245M13 (1) (order this)
    slc13a1Encodes: [EST] cb1073 (1) (order this)
    [cDNA] MGC:66005 (1) (order this), MGC:77545 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_199281 (1) 2447bp
    Genomic GenBank:BX322610 (1) 72706bp
    Select Tool
    Polypeptide UniProtKB:A0A2R8QHF0 (1) 597aa
    Sequence Clusters UniGene:83210 (1)
    Sequence Information (all 15)
    OTHER slc13a1 GENE PAGES
  • Alliance (1)
  • Gene:387592 (1)
  • VEGA:OTTDARG00000021233 (1)
  • ORTHOLOGY for slc13a1 (Chr: 25)
    CITATIONS (21)