| ZFIN ID: ZDB-GENE-031126-4 |
| Gene Name: | forkhead box I3b | |||||||||||||
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| Gene Symbol: | foxi3b Nomenclature History |
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| Gene Type: | protein_coding_gene | |||||||||||||
| Location: | Chr: 14 Mapping Details/Browsers | |||||||||||||
| Description: | Predicted to have DNA-binding transcription factor activity, RNA polymerase II-specific. Involved in epidermal cell fate specification. Predicted to localize to nucleus. Is expressed in several structures, including ectoderm; integument; ionocyte; ionocyte progenitor cell; and yolk. Human ortholog(s) of this gene implicated in autosomal recessive nonsyndromic deafness 4. Orthologous to several human genes including FOXI1 (forkhead box I1). | |||||||||||||
| Genome Resources: | Alliance (1), Gene:387258 (1), Ensembl(GRCz11):ENSDARG00000009550 (1) | |||||||||||||
| All Expression Data: | 11 figures from 7 publications |
| Wild-type Stages, Structures: | Segmentation:1-4 somites (10.33h-11.66h) to Larval:Day 4 (96.0h-120.0h) |
MUTATIONS AND SEQUENCE TARGETING REAGENTS
| Allele | Type | Localization | Consequence | Mutagen | Suppliers |
|---|---|---|---|---|---|
| sa22519 | Point Mutation | Unknown | Premature Stop | ENU |
|
Sequence Targeting Reagents
| Targeting Reagent | Created Alleles | Publications |
|---|---|---|
| MO1-foxi3b | N/A | 1 |
| MO2-foxi3b | N/A | 3 |
| MO3-foxi3b | N/A | 1 |
| MO4-foxi3b | N/A | 1 |
| MO5-foxi3b | N/A | 2 |
PHENOTYPE
| Data: | 3 figures from 2 publications |
| Observed in: |
GENE ONTOLOGY
| Ontology | GO Term |
|---|---|
| Biological Process | epidermal cell fate specification (more) |
| Cellular Component | nucleus (more) |
| Molecular Function | DNA binding (more) |
| Type | Name | Length (nt) | Analysis | |
|---|---|---|---|---|
| mRNA |
foxi3b-201
(1)
|
1865 |
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|
| Browsers: UCSC, NCBI, Ensembl, ZFIN |
INTERACTIONS AND PATHWAYS
ANTIBODIES
| Name | Type | Isotype | Host Organism | Assay | Source | Publications |
|---|---|---|---|---|---|---|
| Ab1-foxi3b | polyclonal | Rabbit | IHC | 1 |
PLASMIDS
No data available
CONSTRUCTS WITH SEQUENCES FROM foxi3b
No data available
MARKER RELATIONSHIPS
| foxi3b Contained in: | [BAC] CH211-232M8 (1) |
| foxi3b Encodes: | [cDNA] MGC:193980 (1), MGC:193987 (1) |
SEQUENCE INFORMATION
| Type | Accession # | Length (nt/aa) | Analysis |
|---|---|---|---|
| RNA | RefSeq:NM_198918 (1) | 1300 nt |
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| Genomic | GenBank:BX248097 (1) | 171333 nt | |
| Polypeptide | UniProtKB:B3DGC2 (1) | 383 aa |
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ORTHOLOGY for foxi3b (
Chr:
14
)
CITATIONS (33)