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ZIRC
ZFIN ID: ZDB-GENE-031114-3
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Gene Name: Fli-1 proto-oncogene, ETS transcription factor b
Gene Symbol: fli1b
Sequence Ontology ID : SO:0001217

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Previous Name: zgc:5777174

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(Including Attributions)
Location: Chr: 16 Mapping Details/Browsers
Nomenclature History
Note: novel protein similar to fli1 (friend leukemia integration 1)
AUTOMATED DESCRIPTION
Predicted to have DNA-binding transcription factor activity, RNA polymerase II-specific. Involved in angiogenesis; regulation of transcription, DNA-templated; and vasculogenesis. Predicted to  ...
GENE EXPRESSION
All Expression Data: 9 figures from 6 publications
Wild-type Stages, Structures: Segmentation:5-9 somites (11.66h-14.0h) to Larval:Protruding-mouth (72.0h-96.0h, 3.5mm)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la027761Tg Transgenic Insertion Unknown Unknown DNA
sa36230 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
    • tpl50Gt Transgenic Insertion Intron 1 Unknown DNA
    tpl95Gt Transgenic Insertion Unknown Unknown DNA
    Targeting reagents:
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH fli1b HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    Bleeding disorder, platelet-type, 21 617443
    DISEASE ASSOCIATED WITH fli1b VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process regulation of transcription, DNA-templated (more)
    Cellular Component nucleus (more)
    Molecular Function DNA binding (more)
    GO Terms (all 11)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000418 (1)
  • InterPro:IPR003118 (1)
  • InterPro:IPR013761 (1)
  • InterPro:IPR036388 (1)
  • InterPro:IPR036390 (1)
  • PROSITE:PS00345 (1)
  • PROSITE:PS00346 (1)
  • PROSITE:PS50061 (1)
  • PROSITE:PS51433 (1)
  • Pfam:PF00178 (1)
  • Pfam:PF02198 (1)
    • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA fli1b-201 (1) 2704
    Select Tool
    fli1b-203 (1) 2781
    Select Tool
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIES
    PLASMIDS
    Addgene
    CONSTRUCTS WITH SEQUENCES FROM fli1b No data available
    MARKER RELATIONSHIPS
    fli1b Contained in: [BAC] CH211-225P5 (1) (order this)
    fli1b Encodes: [EST] IMAGE:5777174
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001008780 (1) 2804 bp
    Select Tool
    Genomic GenBank:BX649388 (1) 177865 bp
    Select Tool
    Polypeptide UniProtKB:F1R5K9 (1) 467 aa
    Select Tool
    Sequence Clusters UniGene:80968 (1)
    Sequence Information (all 33)
    OTHER fli1b GENE PAGES
  • Alliance (1)
  • Gene:386723 (1)
  • VEGA:OTTDARG00000009675 (1)
  • Ensembl(GRCz11):ENSDARG00000040080 (2)
    • ORTHOLOGY for fli1b ( Chr: 16 )
    CITATIONS (46)