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ZIRC
ZFIN ID: ZDB-GENE-031114-1
Gene Name: SRY-box transcription factor 8b
Gene Symbol: sox8b    Nomenclature History

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Previous Names: sox8, zgc:109880

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 3 Mapping Details/Browsers
Description: Predicted to have DNA-binding transcription activator activity, RNA polymerase II-specific. Predicted to be involved in morphogenesis of an epithelium; oligodendrocyte differentiation; and positive regulation of transcription by RNA polymerase II. Predicted to localize to the nucleus. Is expressed in oocyte. Orthologous to human SOX8 (SRY-box transcription factor 8).
Genome Resources: Alliance (1),  Gene:386704 (1),  Ensembl(GRCz11):ENSDARG00000037782 (1)
GENE EXPRESSION
All Expression Data: Fig. 4 from Rodríguez-Marí et al., 2005
Wild-type Stages, Structures: Adult (90d-730d, breeding adult) to Adult (90d-730d, breeding adult)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS No data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH sox8b HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH sox8b VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process regulation of transcription, DNA-templated (more)
Cellular Component nucleus (more)
Molecular Function DNA binding (more)
GO Terms (all 8)
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA sox8b-201 (1)    Ensembl 1902
Browsers: UCSCNCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM sox8b No data available
MARKER RELATIONSHIPS
sox8b Contained in: [BAC] CH211-225N18 (1) (order this)
[Fosmid] CH1073-384E4 (1) (order this)
sox8b Encodes: [cDNA] MGC:109880 (1)
SEQUENCE INFORMATION
Type Accession # Length (bp/aa) Analysis
RNA RefSeq:NM_001025465 (1) 1934 bp
Genomic GenBank:BX470259 (1) 188687 bp
Select Tool
Polypeptide UniProtKB:Q52W08 (1) 358 aa
Sequence Clusters UniGene:45502 (1)
Sequence Information (all 14)
ORTHOLOGY for sox8b ( Chr: 3 )
CITATIONS (38)