ZFIN ID: ZDB-GENE-031114-1
Gene Name: SRY (sex determining region Y)-box 8b
Gene Symbol: sox8b
Sequence Ontology ID : SO:0000704

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Previous Names: sox8, zgc:109880

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(Including Attributions)
Location: Chr: 3 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: Fig. 4 from Rodríguez-Marí et al., 2005
Wild-type Stages, Structures: Adult (90d-730d, breeding adult) to Adult (90d-730d, breeding adult)
  oocyte
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTSNo data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH sox8b HUMAN ORTHOLOGNo data available
GENE ONTOLOGY
Ontology GO Term
Biological Process regulation of transcription, DNA-templated (more)
Cellular Component nucleus (more)
Molecular Function DNA binding (more)
GO Terms (all 4)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR009071 (1)
  • InterPro:IPR022151 (1)
  • InterPro:IPR031265 (1)
  • InterPro:IPR036910 (1)
  • PROSITE:PS50118 (1)
  • Pfam:PF00505 (1)
  • Pfam:PF12444 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA sox8b-001 (1) 1902
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM sox8b No data available
    MARKER RELATIONSHIPS
    sox8bContained in: [BAC] CH211-225N18 (1) (order this)
    [Fosmid] CH1073-384E4 (1) (order this)
    sox8bEncodes: [cDNA] MGC:109880 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001025465 (1) 1934bp
    Genomic GenBank:BX470259 (1) 188687bp
    Select Tool
    Polypeptide UniProtKB:Q52W08 (1) 358aa
    Sequence Clusters UniGene:45502 (1)
    Sequence Information (all 14)
    OTHER sox8b GENE PAGES
  • Alliance (1)
  • Gene:386704 (1)
  • VEGA:OTTDARG00000020320 (1)
  • Ensembl(GRCz10):ENSDARG00000037782 (1)
  • ORTHOLOGY for sox8b (Chr: 3)
    CITATIONS (35)