ZFIN ID: ZDB-GENE-031104-1
Gene Name: calcium channel, voltage-dependent, L type, alpha 1F subunit
Gene Symbol: cacna1fb    Nomenclature History

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Previous Names: cacna1f, ZfCav1.4 (1)

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 8 Mapping Details/Browsers
Description: Predicted to have high voltage-gated calcium channel activity. Predicted to be involved in calcium ion import. Predicted to localize to voltage-gated calcium channel complex. Is expressed in atrium; cardiac ventricle; and retinal inner nuclear layer. Human ortholog(s) of this gene implicated in Aland Island eye disease; X-linked cone-rod dystrophy 3; congenital stationary night blindness; and congenital stationary night blindness 2A. Orthologous to human CACNA1F (calcium voltage-gated channel subunit alpha1 F).
Genome Resources: Alliance (1),  Gene:559964 (1),  Ensembl(GRCz11):ENSDARG00000023683 (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la026425Tg Transgenic Insertion Unknown Unknown DNA
sa1442 Point Mutation Unknown Splice Site ENU
sa10599 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa14371 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa34385 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa41191 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH cacna1fb HUMAN ORTHOLOG
    Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
    Aland Island eye disease Alliance Aland Island eye disease 300600
    congenital stationary night blindness 2A Alliance Night blindness, congenital stationary (incomplete), 2A, X-linked 300071
    X-linked cone-rod dystrophy 3 Alliance Cone-rod dystrophy, X-linked, 3 300476
    DISEASE ASSOCIATED WITH cacna1fb VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process calcium ion transmembrane transport (more)
    Cellular Component integral component of membrane (more)
    Molecular Function calcium channel activity (more)
    GO Terms (all 17)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA cacna1fb-202 (1)    Ensembl 4835
    cacna1fb-203 (1)    Ensembl 1032
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM cacna1fb No data available
    MARKER RELATIONSHIPS
    cacna1fb Contained in: [BAC] CH211-157C18 (1), DKEY-70P6 (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001324496 (1)
    Genomic GenBank:AL831748 202357 nt Blast at MegaBLAST
    Polypeptide UniProtKB:F1QH36 (1) 2065 aa
    Sequence Information (all 21)
    ORTHOLOGY for cacna1fb ( Chr: 8 )
    CITATIONS (28)