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ZIRC
ZFIN ID: ZDB-GENE-031030-3
Gene Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 49
Gene Symbol: ddx49
Sequence Ontology ID : SO:0000704

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Previous Names: wu:fb82g04 (1), wu:fd12e05

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(Including Attributions)
Location: Chr: 11 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have RNA binding activity and RNA helicase activity. Predicted to be involved in rRNA processing. Predicted to localize to the nucleus. Orthologous to human DDX49 (DEAD-box helicase 49).
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:56128]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa4404 Point Mutation Unknown Premature Stop ENU
sa24887 Point Mutation Unknown Splice Site ENU
PHENOTYPE No data available
DISEASE ASSOCIATED WITH ddx49 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH ddx49 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process RNA secondary structure unwinding (more)
Cellular Component cytoplasm (more)
Molecular Function ATP binding (more)
GO Terms (all 9)
TRANSCRIPTS
Type Name Length (bp) Analysis
ncRNA ddx49-003 (1) 604
mRNA ddx49-201 (1) 1632
ddx49-203 (1) 799
GENE PRODUCT DESCRIPTION
INTERACTIONS AND PATHWAYS
ANTIBODIESNo data available
PLASMIDSNo data available
CONSTRUCTS WITH SEQUENCES FROM ddx49 No data available
MARKER RELATIONSHIPS
ddx49Contained in: [BAC] CH211-255D18 (1) (order this)
ddx49Encodes: [EST] fb82g04 (1), fd12e05
[cDNA] MGC:56128 (1) (order this), MGC:86694 (1) (order this)
SEQUENCE INFORMATION
Type Accession # Length (bp/aa) Analysis
RNA RefSeq:NM_198365 (1) 1729bp
Genomic GenBank:BX936438 (1) 188269bp
Select Tool
Polypeptide UniProtKB:Q5RGB7 (1) 468aa
Sequence Clusters UniGene:77634 (1)
Sequence Information (all 37)
ORTHOLOGY for ddx49 (Chr: 11)
CITATIONS (20)