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General Information
ZIRC
ZFIN ID: ZDB-GENE-031030-1
Gene Name: TAR DNA binding protein, like
Gene Symbol: tardbpl
Sequence Ontology ID : SO:0000704

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Previous Names: tardbp, wu:fb52e05, wu:fe47c11, wu:fj94b04

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(Including Attributions)
Location: Chr: 23 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have double-stranded DNA binding activity; mRNA 3'-UTR binding activity; and single-stranded RNA binding activity. Involved in several processes, including axon extension; blood vessel  ...
GENE EXPRESSION
All Expression Data: 7 figures from 4 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:55467]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Adult (90d-730d, breeding adult)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
mde114 Small Deletion Exon 1 Frameshift, Premature Stop ZINC_FINGER_NUCLEASE
mde159 Small Deletion Exon 1 Frameshift, Premature Stop ZINC_FINGER_NUCLEASE
mde222 Small Deletion Exon 1 Unknown ZINC_FINGER_NUCLEASE
sa39415 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • udm104 Small Deletion Unknown Unknown CRISPR
    Targeting reagents:
    DISEASE ASSOCIATED WITH tardbpl HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH tardbpl VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process axon extension (more)
    Cellular Component nucleoplasm (more)
    Molecular Function nucleic acid binding (more)
    GO Terms (all 13)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    aberrant processed transcript tardbpl-201 (1) 1785
    tardbpl-202 (1) 2244
    mRNA tardbpl-203 (1) 1828
    tardbpl-204 (1) 1773
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIES
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM tardbpl No data available
    MARKER RELATIONSHIPS
    tardbplContained in: [BAC] CH211-129O18 (1) (order this)
    tardbplEncodes: [EST] fb52e05, fe47c11, fj94b04
    [cDNA] MGC:55467 (1) (order this), MGC:77290 (1) (order this), MGC:191428 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_198364 (1) 1797bp
    Genomic GenBank:CR381616 (1) 89029bp
    Select Tool
    Polypeptide UniProtKB:A0A2R8QEL5 (1) 402aa
    Sequence Clusters UniGene:33664 (1)
    Sequence Information (all 36)
    ORTHOLOGY for tardbpl (Chr: 23)
    CITATIONS (28)