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ZIRC
ZFIN ID: ZDB-GENE-031010-34
Gene Name: tetratricopeptide repeat domain 21B
Gene Symbol: ttc21b
Sequence Ontology ID : SO:0000704

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Previous Name: sb:cb947

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(Including Attributions)
Location: Chr: 9 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Involved in gastrulation; predicted to localize to the intraciliary transport particle A; orthologous to human TTC21B (tetratricopeptide repeat domain 21B).
GENE EXPRESSION
Directly Submitted Expression Data: 6 figures (9 images) from Thisse et al., 2001 [cb947]
Wild-type Stages, Structures: Gastrula:50%-epiboly (5.25h-5.66h) to Hatching:Long-pec (48.0h-60.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa31749 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa34770 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    DISEASE ASSOCIATED WITH ttc21b HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    asphyxiating thoracic dystrophy 4 Short-rib thoracic dysplasia 4 with or without polydactyly 613819
    nephronophthisis 12 Nephronophthisis 12 613820
    DISEASE ASSOCIATED WITH ttc21b VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process gastrulation (more)
    Cellular Component intraciliary transport particle A (more)
    GO Terms (all 4)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA ttc21b-201 (1) 4300
    ttc21b-202 (1) 564
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM ttc21b No data available
    MARKER RELATIONSHIPS
    ttc21bContained in: [BAC] CH211-66E19 (1) (order this)
    ttc21bEncodes: [EST] cb947 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001128258 (1) 4300bp
    Genomic GenBank:AL929294 (1) 162474bp
    Select Tool
    Polypeptide UniProtKB:B0R0W1 (1) 1321aa
    Sequence Clusters UniGene:18627 (1)
    Sequence Information (all 8)
    ORTHOLOGY for ttc21b (Chr: 9)
    CITATIONS (14)