ZFIN ID: ZDB-GENE-031006-8
Gene Name: 5'-nucleotidase, cytosolic II, like 1
Gene Symbol: nt5c2l1    Nomenclature History

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Previous Names: nt5c2, cb904 (1), id:ibd5113, zgc:92102

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 10 Mapping Details/Browsers
Description: Predicted to have 5'-nucleotidase activity. Involved in cellular response to xenobiotic stimulus. Is expressed in blood; eye; tail bud; ventral mesoderm; and yolk syncytial layer. Orthologous to human NT5DC4 (5'-nucleotidase domain containing 4).
Genome Resources: Alliance (1),  Gene:447810 (1),  Ensembl(GRCz11):ENSDARG00000034852 (2)
GENE EXPRESSION
All Expression Data: 9 figures from 4 publications
Directly Submitted Expression Data: 2 figures (2 images) from Kudoh et al., 2001 [ibd5113]
  5 figures (5 images) from Thisse et al., 2001 [cb904]
Wild-type Stages, Structures: Segmentation:14-19 somites (16.0h-19.0h) to Adult (90d-730d, breeding adult)
 
High Throughput Expression: GEO (1) Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa9485 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH nt5c2l1 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH nt5c2l1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process cellular response to xenobiotic stimulus (more)
    Molecular Function metal ion binding (more)
    GO Terms (all 3)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA nt5c2l1-202 (1)    Ensembl 2218
    nt5c2l1-204 (1)    Ensembl 717
    ncRNA nt5c2l1-003 (1)    Ensembl 841
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM nt5c2l1 No data available
    MARKER RELATIONSHIPS
    nt5c2l1 Contained in: [BAC] DKEY-76P7 (1) (order this)
    nt5c2l1 Contains: [STS] chunp30589
    nt5c2l1 Encodes: [EST] cb904 (1) (order this), ibd5113
    [cDNA] MGC:92102 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001004549 (1) 2267 nt
    Genomic GenBank:BX927385 (1) 243665 nt Blast at MegaBLAST
    Polypeptide UniProtKB:Q66I11 (1) 518 aa
    Sequence Information (all 18)
    ORTHOLOGY for nt5c2l1 ( Chr: 10 )
    CITATIONS (21)