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ZIRC
ZFIN ID: ZDB-GENE-031006-4
Gene Name: 4-aminobutyrate aminotransferase
Gene Symbol: abat
Sequence Ontology ID : SO:0001217

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Previous Names: GABA-T (1), cb880 (1), fj82a01, wu:fj82a01 (1)

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(Including Attributions)
Location: Chr: 3 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have 4-aminobutyrate transaminase activity and pyridoxal phosphate binding activity. Predicted to be involved in gamma-aminobutyric acid catabolic process. Predicted to localize to the  ...
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la028889Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa38392 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH abat HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    GABA aminotransferase deficiency GABA-transaminase deficiency 613163
    DISEASE ASSOCIATED WITH abat VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process gamma-aminobutyric acid metabolic process (more)
    Cellular Component mitochondrion (more)
    Molecular Function 4-aminobutyrate transaminase activity (more)
    GO Terms (all 8)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    ncRNA abat-002 (1) 666
    mRNA abat-202 (1) 2179
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM abat No data available
    MARKER RELATIONSHIPS
    abat Contained in: [BAC] CH73-86A17 (1) (order this)
    abat Encodes: [EST] cb880 (1) (order this), fj82a01
    [cDNA] MGC:55707 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_201498 (1) 2253 bp
    Genomic GenBank:CU464204 (1) 93246 bp
    Select Tool
    Polypeptide UniProtKB:I3IRW7 (1) 500 aa
    Sequence Clusters UniGene:76989 (1)
    Sequence Information (all 14)
    ORTHOLOGY for abat ( Chr: 3 )
    CITATIONS (34)