ZFIN Gene: rgs12b

ZFIN ID: ZDB-GENE-031006-13

ZFIN ID: ZDB-GENE-031006-13

Gene Name:

regulator of G protein signaling 12b

Gene Symbol:

rgs12b Nomenclature History

Previous Names:

rgs12 (1), cb958 (1)

Gene Type:

protein_coding_gene

Location:

Chr: 1 Mapping Details/Browsers

Description:

Predicted to have GTPase regulator activity. Predicted to be involved in signal transduction. Is expressed in retina and ventricular zone. Orthologous to human RGS12 (regulator of G protein signaling 12).

Genome Resources:

Alliance (1), Gene:378970 (1), Ensembl(GRCz11):ENSDARG00000036774 (2)

GENE EXPRESSION
Directly Submitted Expression Data:	3 figures (4 images) from Thisse et al., 2001 [cb958]
Wild-type Stages, Structures:	Pharyngula:Prim-15 (30.0h-36.0h) to Hatching:Long-pec (48.0h-60.0h)
	retina ventricular zone
High Throughput Expression:	GEO (1) Expression Atlas (1)

MUTATIONS AND SEQUENCE TARGETING REAGENTS

Allele	Type	Localization	Consequence	Mutagen	Suppliers
sa1121	Point Mutation	Unknown	Premature Stop	ENU
sa9277	Point Mutation	Unknown	Premature Stop	ENU	European Zebrafish Resource Center (EZRC) (order this) Zebrafish International Resource Center (ZIRC) (order this)
sa10087	Point Mutation	Unknown	Premature Stop	ENU	European Zebrafish Resource Center (EZRC) (order this) Zebrafish International Resource Center (ZIRC) (order this)
sa19543	Point Mutation	Unknown	Premature Stop	ENU	European Zebrafish Resource Center (EZRC) (order this) Zebrafish International Resource Center (ZIRC) (order this)
sa31218	Point Mutation	Unknown	Premature Stop	ENU	European Zebrafish Resource Center (EZRC) (order this) Zebrafish International Resource Center (ZIRC) (order this)

PHENOTYPE No data available

DISEASE ASSOCIATED WITH rgs12b HUMAN ORTHOLOG No data available

DISEASE ASSOCIATED WITH rgs12b VIA EXPERIMENTAL MODELS No data available

GENE ONTOLOGY

Ontology	GO Term
Biological Process	signal transduction (more)
Cellular Component	cytoplasm (more)
Molecular Function	GTPase activator activity (more)

GO Terms (all 5)

PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available

TRANSCRIPTS
Type	Name	Length (nt)	Analysis
mRNA	rgs12b-201 (1)	5981	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	rgs12b-202 (1)	5413	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	rgs12b-203 (1)	5510	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	rgs12b-004 (1)	625	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	rgs12b-005 (1)	310	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Browsers: UCSC, NCBI, Ensembl, ZFIN

INTERACTIONS AND PATHWAYS

ANTIBODIES No data available

PLASMIDS No data available

CONSTRUCTS WITH SEQUENCES FROM rgs12b No data available

MARKER RELATIONSHIPS

rgs12b Contained in:	[BAC] DKEY-180B4 (1) (order this)
rgs12b Encodes:	[EST] cb958 (1) (order this) [cDNA] MGC:194802 (1)

SEQUENCE INFORMATION

Type	Accession #	Length (nt/aa)	Analysis
RNA	RefSeq:NM_214724 (1)	5981 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
Genomic	GenBank:AL954671 (1)	142357 nt	Select Tool MegaBLAST Ensembl
Polypeptide	UniProtKB:B3DK51 (1)	1540 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast

Sequence Information (all 35)

ORTHOLOGY for rgs12b ( Chr: 1 )

CITATIONS (23)

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