ZFIN ID: ZDB-GENE-031001-10
Gene Name: EF-hand domain (C-terminal) containing 2
Gene Symbol: efhc2    Nomenclature History

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Previous Names: cb847 (1), flj22843 (1), zgc:152706

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 9 Mapping Details/Browsers
Description: Predicted to have calcium ion binding activity. Involved in multi-ciliated epithelial cell differentiation and specification of pronephric distal tubule identity. Predicted to colocalize with microtubule. Is expressed in several structures, including forerunner cell group; intermediate mesoderm; notochord; sensory system; and tail bud. Orthologous to human EFHC2 (EF-hand domain containing 2).
Genome Resources: Alliance (1),  Gene:567323 (1),  Ensembl(GRCz11):ENSDARG00000004204 (2)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa21529 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa31733 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa41465 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa45363 Point Mutation Unknown Splice Site ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    MO1-efhc2 N/A 1
    MO2-efhc2 N/A 1
    DISEASE ASSOCIATED WITH efhc2 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH efhc2 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process multi-ciliated epithelial cell differentiation (more)
    Cellular Component axoneme (more)
    Molecular Function calcium ion binding (more)
    GO Terms (all 11)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    aberrant processed transcript efhc2-202 (1)    Ensembl 2458
    mRNA efhc2-201 (1)    Ensembl 2433
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM efhc2 No data available
    MARKER RELATIONSHIPS
    efhc2 Contained in: [BAC] CH211-222M21 (1)
    efhc2 Encodes: [cDNA] MGC:152706 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001309817 (1)
    Genomic GenBank:BX572627 (1) 209758 nt Blast at MegaBLAST
    Polypeptide UniProtKB:B8A5Q4 (1) 748 aa
    Sequence Information (all 17)
    ORTHOLOGY for efhc2 ( Chr: 9 )
    CITATIONS (19)