ZFIN ID: ZDB-GENE-030909-12
Gene Name: GTP binding protein 1
Gene Symbol: gtpbp1    Nomenclature History

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Previous Names: cb858 (1), wu:fb36e06, wu:fi39g05, zgc:66228

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 3 Mapping Details/Browsers
Description: Predicted to have translation elongation factor activity. Predicted to be involved in translational elongation. Is expressed in intermediate cell mass of mesoderm; intermediate mesoderm; lens; solid lens vesicle; and ventral mesoderm. Orthologous to human GTPBP1 (GTP binding protein 1).
Genome Resources: Alliance (1),  Gene:378721 (1),  Ensembl(GRCz11):ENSDARG00000053467 (2)
GENE EXPRESSION
All Expression Data: 7 figures from 3 publications
Directly Submitted Expression Data: 4 figures (6 images) from Thisse et al., 2001 [cb858]
Wild-type Stages, Structures: Segmentation:1-4 somites (10.33h-11.66h) to Hatching:Long-pec (48.0h-60.0h)
 
High Throughput Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa10030 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa33222 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH gtpbp1 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH gtpbp1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process translational elongation (more)
    Molecular Function GTPase activity (more)
    GO Terms (all 4)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA gtpbp1-201 (1)    Ensembl 3219
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM gtpbp1 No data available
    MARKER RELATIONSHIPS
    gtpbp1 Contained in: [BAC] DKEY-283B1 (1) (order this)
    gtpbp1 Encodes: [EST] cb858 (1) (order this), fb36e06 (1), fi39g05 (1)
    [cDNA] MGC:66228 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_213475 (1) 3018 nt
    Genomic GenBank:CR396582 (1) 154857 nt
    Select Tool
    Polypeptide UniProtKB:F1RBD1 (1) 657 aa
    Sequence Information (all 20)
    ORTHOLOGY for gtpbp1 ( Chr: 3 )
    CITATIONS (24)