ZFIN ID: ZDB-GENE-030826-25
Gene Name: musashi RNA-binding protein 2a
Gene Symbol: msi2a    Nomenclature History

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Previous Names: msi2, cb746 (1), fi47b09, wu:fb02d08 (1), wu:fi32d12 (1), wu:fi47b09 (1)

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 10 Mapping Details/Browsers
Description: Predicted to have RNA binding activity. Predicted to be involved in regulation of RNA metabolic process. Predicted to localize to cytoplasm; nucleus; and polysome. Is expressed in cranial ganglion; diencephalon; hindbrain; tegmentum; and telencephalon. Orthologous to human MSI2 (musashi RNA binding protein 2).
Genome Resources: Alliance (1),  Gene:100002680 (1),  Ensembl(GRCz11):ENSDARG00000033901 (1)
GENE EXPRESSION
Directly Submitted Expression Data: 5 figures (8 images) from Thisse et al., 2001 [cb746]
Wild-type Stages, Structures: Segmentation:14-19 somites (16.0h-19.0h) to Hatching:Long-pec (48.0h-60.0h)
 
High Throughput Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la011869Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • la011870Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • la011871Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • la017555Tg Transgenic Insertion Unknown Unknown DNA
    la017557Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa12004 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa34961 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • ws1208Tg Transgenic Insertion Intron 13 Unknown DNA
  • European Zebrafish Resource Center (EZRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH msi2a HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH msi2a VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Cellular Component integral component of membrane (more)
    Molecular Function nucleic acid binding (more)
    GO Terms (all 6)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA msi2a-202 (1)    Ensembl 2259
    ncRNA msi2a-002 (1)    Ensembl 521
    msi2a-003 (1)    Ensembl 493
    msi2a-004 (1)    Ensembl 406
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM msi2a No data available
    MARKER RELATIONSHIPS
    msi2a Contained in: [BAC] DKEY-65J4 (1) (order this), DKEY-96F1 (1) (order this)
    msi2a Encodes: [EST] cb746 (1) (order this), fb02d08, fi32d12, fi47b09
    [cDNA] MGC:55422 (1), MGC:191988 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_212796 (1) 2161 nt
    Genomic GenBank:CR931799 (1) 217990 nt Blast at MegaBLAST
    Polypeptide UniProtKB:Q7ZW10 (1) 388 aa
    Sequence Information (all 28)
    ORTHOLOGY for msi2a ( Chr: 10 )
    CITATIONS (29)