ZFIN ID: ZDB-GENE-030730-1
Gene Name: neuronal differentiation 4
Gene Symbol: neurod4
Sequence Ontology ID : SO:0000704

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Previous Name: zath3 (1)

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(Including Attributions)
Location: Chr: 23 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have DNA binding activity and protein dimerization activity; involved in several processes, including nervous system development, neural plate morphogenesis, and olfactory placode  ...
GENE EXPRESSION
All Expression Data: 42 figures from 19 publications
Directly Submitted Expression Data: 7 figures (19 images) from Thisse et al., 2004 [MGC:73042]
  12 figures (12 images) from Rauch et al., 2003 [fb17e09]
Wild-type Stages, Structures: Gastrula:Bud (10.0h-10.33h) to Larval:Day 5 (120.0h-144.0h, 3.9mm, 6 teeth)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa67 Point Mutation Unknown Unknown ENU
sa44000 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    PHENOTYPE
    Data: 2 figures from Madelaine et al., 2011
    Observed in:
    DISEASE ASSOCIATED WITH neurod4 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH neurod4 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process habenula development (more)
    Cellular Component nucleus (more)
    Molecular Function DNA binding (more)
    GO Terms (all 12)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR011598 (1)
  • InterPro:IPR016637 (1)
  • InterPro:IPR022575 (1)
  • InterPro:IPR032651 (1)
  • InterPro:IPR036638 (1)
  • PROSITE:PS50888 (1)
  • Pfam:PF00010 (1)
  • Pfam:PF12533 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA neurod4-201 (1) 1967
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM neurod4 No data available
    MARKER RELATIONSHIPS
    neurod4Contained in: [BAC] DKEY-104L7 (1) (order this)
    neurod4Encodes: [EST] fb17e09 (1) (order this)
    [cDNA] MGC:73042 (1) (order this), MGC:86591 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_170762 (1) 1969bp
    Genomic GenBank:CU041401 (1) 78576bp
    Select Tool
    Polypeptide UniProtKB:F1QWM8 (1) 348aa
    Sequence Clusters UniGene:10718 (1)
    Sequence Information (all 22)
    OTHER neurod4 GENE PAGES
  • Alliance (1)
  • Gene:266958 (1)
  • VEGA:OTTDARG00000028139 (1)
  • ORTHOLOGY for neurod4 (Chr: 23)
    CITATIONS (53)