ZFIN ID: ZDB-GENE-030729-30
Gene Name: SRA stem-loop interacting RNA binding protein
Gene Symbol: slirp    Nomenclature History

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Previous Names: sb:cb657 (1), si:ch73-276n11.1

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 17 Mapping Details/Browsers
Description: Predicted to have RNA binding activity. Predicted to be involved in mitochondrion morphogenesis and negative regulation of mitochondrial RNA catabolic process. Predicted to localize to mitochondrion and ribonucleoprotein complex. Is expressed in several structures, including alar plate midbrain region; digestive system; musculature system; nervous system; and segmental plate. Orthologous to human SLIRP (SRA stem-loop interacting RNA binding protein).
Genome Resources: Alliance (1),  Gene:368358 (1),  Ensembl(GRCz11):ENSDARG00000097753 (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS No data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH slirp HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH slirp VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process mitochondrion morphogenesis (more)
Cellular Component mitochondrion (more)
Molecular Function nucleic acid binding (more)
GO Terms (all 5)
PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA slirp-201 (1)    Ensembl 548
Browsers: UCSCNCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM slirp No data available
MARKER RELATIONSHIPS
slirp Contained in: [BAC] CH73-276N11 (1)
slirp Encodes: [EST] cb657 (1) (order this)
SEQUENCE INFORMATION
Type Accession # Length (nt/aa) Analysis
RNA RefSeq:NM_001305612 (1)
Genomic GenBank:CU695234 (1) 90779 nt
Select Tool
Polypeptide UniProtKB:X1WCD3 (1) 103 aa
Sequence Information (all 11)
ORTHOLOGY for slirp ( Chr: 17 )
CITATIONS (15)