ZFIN ID: ZDB-GENE-030722-1
Gene Name: mesogenin 1
Gene Symbol: msgn1
Sequence Ontology ID : SO:0000704

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Previous Names: mespo (1), pMeso1a (1), wu:fc39h09, zgc:109769

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(Including Attributions)
Location: Chr: 4 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 23 figures from 15 publications
Directly Submitted Expression Data: 6 figures (9 images) from Thisse et al., 2004 [MGC:109769]
Wild-type Stages, Structures: Blastula:30%-epiboly (4.66h-5.25h) to Hatching:Long-pec (48.0h-60.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
fh273 Point Mutation Unknown Unknown ENU
  • China Zebrafish Resource Center (CZRC, ZKO consortium) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • msgn1_unrecovered Point Mutation Unknown Unknown ENU
    sa33349 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    PHENOTYPE
    Data: 7 figures from 3 publications
    Observed in:
    DISEASE ASSOCIATED WITH msgn1 HUMAN ORTHOLOG No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process mesoderm development (more)
    Cellular Component nucleus (more)
    Molecular Function DNA binding (more)
    GO Terms (all 15)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR011598 (1)
  • InterPro:IPR036638 (1)
  • PROSITE:PS50888 (1)
  • Pfam:PF00010 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA msgn1-001 (1) 1971
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM msgn1
    MARKER RELATIONSHIPS
    msgn1Contained in: [BAC] CH211-222H17 (1) (order this), CH211-249I14 (1) (order this)
    msgn1Encodes: [EST] fc39h09, wz13339
    [cDNA] MGC:109769 (1) (order this), MGC:174017 (1) (order this), MGC:192585 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_182882 (1) 1674bp
    Genomic GenBank:BX890562 (1) 195554bp
    Select Tool
    Polypeptide UniProtKB:B2RY95 (1) 131aa
    Sequence Clusters UniGene:106405 (1)
    Sequence Information (all 33)
    OTHER msgn1 GENE PAGES
  • Alliance (1)
  • Gene:360135 (1)
  • VEGA:OTTDARG00000007157 (1)
  • Ensembl(GRCz11):ENSDARG00000070546 (1)
  • ORTHOLOGY for msgn1 (Chr: 4)
    CITATIONS (51)