ZFIN ID: ZDB-GENE-030710-1
Gene Name: reticulon 4a
Gene Symbol: rtn4a
Sequence Ontology ID : SO:0000704

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Previous Names: rtn4, Nogo-B (1), nogo (1), wu:fb17a02, wu:fb22f12, wu:fd61a07, zgc:92163

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(Including Attributions)
Location: Chr: 6 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
GENE EXPRESSION
All Expression Data: 9 figures from 7 publications
Wild-type Stages, Structures: Blastula:1k-cell (3.0h-3.33h) to Adult (90d-730d, breeding adult)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Targeting reagents:
PHENOTYPE
Data: 9 figures from 5 publications
Observed in:
DISEASE ASSOCIATED WITH rtn4a HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH rtn4a VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process axonogenesis (more)
Cellular Component endoplasmic reticulum (more)
Molecular Function protein binding (more)
GO Terms (all 18)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR003388 (1)
  • PROSITE:PS50845 (1)
  • Pfam:PF02453 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA rtn4a-001 (1) 2138
    rtn4a-002 (1) 1887
    rtn4a-003 (1) 2079
    rtn4a-004 (1) 1647
    ncRNA rtn4a-005 (1) 573
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIES
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM rtn4a
    MARKER RELATIONSHIPS
    rtn4aContained in: [BAC] DKEY-103K8 (1) (order this)
    rtn4aEncodes: [EST] fb17a02, fb22f12, fd61a07
    [cDNA] MGC:92163 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001079912 (1) 2145bp
    Genomic GenBank:BX324134 (1) 219514bp Blast at MegaBLAST
    Polypeptide UniProtKB:Q4G5W2 (1) 322aa
    Sequence Clusters UniGene:121711 (1)
    Sequence Information (all 50)
    OTHER rtn4a GENE PAGES
  • Alliance (1)
  • Gene:447816 (1)
  • VEGA:OTTDARG00000019716 (1)
  • ORTHOLOGY for rtn4a (Chr: 6)
    CITATIONS (30)