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ZIRC
ZFIN ID: ZDB-GENE-030616-579
Gene Name: pancreas associated transcription factor 1a
Gene Symbol: ptf1a
Sequence Ontology ID : SO:0000704

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Previous Names: Ptfa (1), si:zc142h2.2, zgc:112216

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(Including Attributions)
Location: Chr: 2 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Exhibits DNA-binding activity transcription factor activity and sequence-specific DNA binding activity; involved in several processes, including amacrine cell differentiation, animal organ  ...
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
ihb164 Small Deletion Unknown Unknown CRISPR
  • China Zebrafish Resource Center (CZRC, ZKO consortium) (order this)
  • ihb165 Insertion Unknown Unknown CRISPR
  • China Zebrafish Resource Center (CZRC, ZKO consortium) (order this)
  • s922 Point Mutation Unknown Missense ENU
    sa126 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa44533 Point Mutation Unknown Unknown ENU
    Targeting reagents:
    DISEASE ASSOCIATED WITH ptf1a HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    Pancreatic agenesis 2 615935
    Pancreatic and cerebellar agenesis 609069
    DISEASE ASSOCIATED WITH ptf1a VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process positive regulation of transcription, DNA-templated (more)
    Cellular Component cytoplasm (more)
    Molecular Function DNA-binding transcription factor activity (more)
    GO Terms (all 18)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR011598 (1)
  • InterPro:IPR036638 (1)
  • PROSITE:PS50888 (1)
  • Pfam:PF00010 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA ptf1a-201 (1) 798
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    MARKER RELATIONSHIPS
    ptf1aContained in: [BAC] CH211-142H2 (1) (order this)
    ptf1aEncodes: [EST] eu536 (1)
    [cDNA] MGC:112216 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_207641 (1) 1211bp
    Genomic GenBank:AL845362 (1) 161465bp
    Select Tool
    Polypeptide UniProtKB:Q7ZSX3 (1) 265aa
    Sequence Clusters UniGene:86563 (1)
    Sequence Information (all 15)
    ORTHOLOGY for ptf1a (Chr: 2)
    CITATIONS (99)