| ZFIN ID: ZDB-GENE-030616-44 |
| Gene Name: | ATPase family AAA domain containing 1b | |||||||||||||
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| Gene Symbol: | atad1b Nomenclature History |
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Attributions
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| Previous Names: | atad1, si:bz1g13.1 (1), wu:fc15a10 (1), zgc:110042 | |||||||||||||
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| Gene Type: | protein_coding_gene | |||||||||||||
| Location: | Chr: 12 Mapping Details/Browsers | |||||||||||||
| Description: | Predicted to have ATP binding activity and ATPase activity. Predicted to localize to integral component of membrane; peroxisome; and postsynaptic membrane. Human ortholog(s) of this gene implicated in hyperekplexia 4. Orthologous to human ATAD1 (ATPase family AAA domain containing 1). | |||||||||||||
| Genome Resources: | Alliance (1), Gene:368412 (1), Ensembl(GRCz11):ENSDARG00000056609 (2) | |||||||||||||
| Directly Submitted Expression Data: | 1 figure (1 image) from Thisse et al., 2004 [MGC:110042] |
| Wild-type Stages, Structures: | Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h) |
| High Throughput Expression: | GEO (1) , Expression Atlas (1) |
MUTATIONS AND SEQUENCE TARGETING REAGENTS
| Allele | Type | Localization | Consequence | Mutagen | Suppliers |
|---|---|---|---|---|---|
| sa1271 | Point Mutation | Unknown | Splice Site | ENU |
|
| sa38880 | Point Mutation | Unknown | Premature Stop | ENU |
|
| Disease Ontology Term | Multi-Species Data | OMIM Term | OMIM Phenotype ID |
|---|---|---|---|
| Hyperekplexia 4 | 618011 |
GENE ONTOLOGY
| Ontology | GO Term |
|---|---|
| Cellular Component | cell junction (more) |
| Molecular Function | ATPase activity (more) |
| Type | Name | Length (nt) | Analysis | |
|---|---|---|---|---|
| mRNA |
atad1b-201
(1)
|
1283 |
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|
| Browsers: UCSC, NCBI, Ensembl, ZFIN |
INTERACTIONS AND PATHWAYS
ANTIBODIES
No data available
PLASMIDS
No data available
CONSTRUCTS WITH SEQUENCES FROM atad1b
No data available
MARKER RELATIONSHIPS
| atad1b Contained in: | [BAC] DKEY-231J9 (1) (order this), RP71-1G13 (1) |
| atad1b Encodes: |
[EST]
fc15a10
[cDNA] MGC:110042 (1), MGC:191363 (1) |
SEQUENCE INFORMATION
| Type | Accession # | Length (nt/aa) | Analysis |
|---|---|---|---|
| RNA | RefSeq:NM_001024421 (1) | 1290 nt |
Select Tool
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| Genomic | GenBank:AL731788 (1) | 165909 nt | |
| Polypeptide | UniProtKB:B2GP29 (1) | 362 aa |
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ORTHOLOGY for atad1b (
Chr:
12
)
CITATIONS (28)