ZFIN ID: ZDB-GENE-030616-44
Gene Name: ATPase family AAA domain containing 1b
Gene Symbol: atad1b    Nomenclature History

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Previous Names: atad1, si:bz1g13.1 (1), wu:fc15a10 (1), zgc:110042

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 12 Mapping Details/Browsers
Description: Predicted to have ATP binding activity and ATPase activity. Predicted to localize to integral component of membrane; peroxisome; and postsynaptic membrane. Human ortholog(s) of this gene implicated in hyperekplexia 4. Orthologous to human ATAD1 (ATPase family AAA domain containing 1).
Genome Resources: Alliance (1),  Gene:368412 (1),  Ensembl(GRCz11):ENSDARG00000056609 (2)
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:110042]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
High Throughput Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa1271 Point Mutation Unknown Splice Site ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa38880 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH atad1b HUMAN ORTHOLOG
    Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
    Hyperekplexia 4 618011
    DISEASE ASSOCIATED WITH atad1b VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Cellular Component cell junction (more)
    Molecular Function ATPase activity (more)
    GO Terms (all 11)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA atad1b-201 (1)    Ensembl 1283
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM atad1b No data available
    MARKER RELATIONSHIPS
    atad1b Contained in: [BAC] DKEY-231J9 (1) (order this), RP71-1G13 (1)
    atad1b Encodes: [EST] fc15a10
    [cDNA] MGC:110042 (1), MGC:191363 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001024421 (1) 1290 nt
    Genomic GenBank:AL731788 (1) 165909 nt
    Select Tool
    Polypeptide UniProtKB:B2GP29 (1) 362 aa
    Sequence Information (all 20)
    ORTHOLOGY for atad1b ( Chr: 12 )
    CITATIONS (28)