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ZIRC
ZFIN ID: ZDB-GENE-030616-44
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Gene Name: ATPase family AAA domain containing 1b
Gene Symbol: atad1b
Sequence Ontology ID : SO:0000704

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Previous Names: atad1, si:bz1g13.1 (1), wu:fc15a10 (1), zgc:110042

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(Including Attributions)
Location: Chr: 12 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have ATP binding activity and ATPase activity. Predicted to localize to several cellular components, including the cell junction; peroxisome; and postsynaptic membrane. Human ortholog(s)  ...
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:110042]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa1271 Point Mutation Unknown Splice Site ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
    • sa38880 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
    • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH atad1b HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    Hyperekplexia 4 618011
    Hyperekplexia 4 618011
    DISEASE ASSOCIATED WITH atad1b VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Cellular Component cell junction (more)
    Molecular Function ATPase activity (more)
    GO Terms (all 12)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR003593 (1)
  • InterPro:IPR003959 (1)
  • InterPro:IPR003960 (1)
  • InterPro:IPR027417 (1)
  • InterPro:IPR041569 (1)
    		•
  • PROSITE:PS00674 (1)
    		•
  • Pfam:PF00004 (1)
  • Pfam:PF17862 (1)
    		•
  • EC:3.6.1.3 (1)
    		•
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA atad1b-201 (1) 1283
    Select Tool
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM atad1b No data available
    MARKER RELATIONSHIPS
    atad1bContained in: [BAC] DKEY-231J9 (1) (order this), RP71-1G13 (1) (order this)
    atad1bEncodes: [EST] fc15a10
    [cDNA] MGC:110042 (1) (order this), MGC:191363 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001024421 (1) 1290bp
    Select Tool
    Genomic GenBank:AL731788 (1) 165909bp
    Select Tool
    Polypeptide UniProtKB:B2GP29 (1) 362aa
    Select Tool
    Sequence Clusters UniGene:78224 (1)
    Sequence Information (all 21)
    OTHER atad1b GENE PAGES
  • Alliance (1)
  • Gene:368412 (1)
  • VEGA:OTTDARG00000001918 (1)
  • Ensembl(GRCz11):ENSDARG00000056609 (2)
    • ORTHOLOGY for atad1b (Chr: 12)
    CITATIONS (26)