ZFIN ID: ZDB-GENE-030616-405
Gene Name: striatin, calmodulin binding protein 3
Gene Symbol: strn3    Nomenclature History

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Previous Names: id:ibd1241, si:busm1-115o7.2, si:dz115o7.2, si:dz234g15.7, wu:fc02f06

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 17 Mapping Details/Browsers
Description: Predicted to have armadillo repeat domain binding activity; calmodulin binding activity; and protein phosphatase 2A binding activity. Predicted to localize to dendrite. Is expressed in somite and tail bud. Orthologous to human STRN3 (striatin 3).
Genome Resources: Alliance (1),  Gene:563124 (1),  Ensembl(GRCz11):ENSDARG00000001729 (2)
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Kudoh et al., 2001 [ibd1241]
Wild-type Stages, Structures: Pharyngula:Prim-5 (24.0h-30.0h) to Pharyngula:Prim-5 (24.0h-30.0h)
 
High Throughput Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la027840Tg Transgenic Insertion Unknown Unknown DNA
sa16391 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • sa23096 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa23097 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa32155 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH strn3 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH strn3 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Cellular Component dendrite (more)
    Molecular Function armadillo repeat domain binding (more)
    GO Terms (all 5)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA strn3-201 (1)    Ensembl 4060
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM strn3 No data available
    MARKER RELATIONSHIPS
    strn3 Contained in: [BAC] DKEY-18B8 (1) (order this)
    [PAC] BUSM1-115O7, BUSM1-234G15 (1)
    strn3 Encodes: [EST] fc02f06, ibd1241 (1)
    [cDNA] MGC:175239 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001013266 (1) 3855 nt
    Genomic GenBank:BX324186 (1) 153540 nt
    Select Tool
    Polypeptide UniProtKB:F1R1W1 (1) 719 aa
    Sequence Information (all 26)
    ORTHOLOGY for strn3 ( Chr: 17 )
    CITATIONS (25)