ZFIN ID: ZDB-GENE-030616-4
Gene Name: chondroitin sulfate synthase 3
Gene Symbol: chsy3
Sequence Ontology ID : SO:0000704

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Previous Names: si:bac7cse.2, si:xx-bac7cse.2

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(Including Attributions)
Location: Chr: 10 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 4 figures from Filipek-Górniok et al., 2013
Wild-type Stages, Structures: Cleavage:2-cell (0.75h-1.0h) to Larval:Protruding-mouth (72.0h-96.0h, 3.5mm)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa9987 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH chsy3 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH chsy3 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Cellular Component Golgi apparatus (more)
    Molecular Function acetylgalactosaminyltransferase activity (more)
    GO Terms (all 7)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR003378 (1)
  • InterPro:IPR008428 (1)
  • InterPro:IPR029044 (1)
  • Pfam:PF02434 (1)
  • Pfam:PF05679 (1)
  • EC:2.4.1.- (1)
  • TRANSCRIPTS No data available
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM chsy3 No data available
    MARKER RELATIONSHIPS
    chsy3Contained in: [BAC] XX-BAC6CSE, XX-BAC7CSE (1)
    chsy3Encodes: [cDNA] MGC:162149 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001089348 (1)
    Genomic GenBank:AL592062 (1) 106778bp
    Select Tool
    Polypeptide UniProtKB:F1QEX3 (1) 821aa
    Sequence Clusters UniGene:140270 (1)
    Sequence Information (all 16)
    OTHER chsy3 GENE PAGES
  • Alliance (1)
  • Gene:368477 (1)
  • Ensembl(GRCz11):ENSDARG00000069472 (2)
  • ORTHOLOGY for chsy3 (Chr: 10)
    CITATIONS (17)