Gene
csmd2
- ID
- ZDB-GENE-030616-39
- Name
- CUB and Sushi multiple domains 2
- Symbol
- csmd2 Nomenclature History
- Previous Names
-
- si:bz1c3.1
- si:ch211-46o5.1
- Type
- protein_coding_gene
- Location
- Chr: 19 Mapping Details/Browsers
- Description
- Predicted to be located in membrane. Orthologous to human CSMD2 (CUB and Sushi multiple domains 2).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 1 figure from Thisse et al., 2004
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- IMAGE:7143158 (1 image)
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
| Allele | Type | Localization | Consequence | Mutagen | Supplier |
|---|---|---|---|---|---|
| mn0313Gt | Transgenic insertion | Unknown | Unknown | DNA | |
| sa8421 | Allele with one point mutation | Unknown | Splice Site | ENU | |
| sa9832 | Allele with one point mutation | Unknown | Premature Stop | ENU | |
| sa10968 | Allele with one point mutation | Unknown | Splice Site | ENU | |
| sa11417 | Allele with one point mutation | Unknown | Splice Site | ENU | |
| sa15257 | Allele with one point mutation | Unknown | Splice Site | ENU | |
| sa29241 | Allele with one point mutation | Unknown | Splice Site | ENU | |
| sa36882 | Allele with one point mutation | Unknown | Splice Site | ENU | |
| sa36883 | Allele with one point mutation | Unknown | Splice Site | ENU | |
| sa36884 | Allele with one point mutation | Unknown | Premature Stop | ENU |
1 - 10 of 14
Show
No data available
Human Disease
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | CUB domain | SEZ6/CSMD/C4BPB Neuronal & Immune Regulators | Spermadhesin, CUB domain superfamily | Sushi/SCR/CCP domain | Sushi/SCR/CCP superfamily |
|---|---|---|---|---|---|---|---|
| UniProtKB:A0A8N7UT85 | InterPro | 3604 |
Interactions and Pathways
No data available
Plasmids
No data available
No data available
| Relationship | Marker Type | Marker | Accession Numbers | Citations |
|---|---|---|---|---|
| Contained in | BAC | CH73-69A4 | ZFIN Curated Data | |
| Contained in | BAC | CH211-46O5 | ZFIN Curated Data | |
| Contained in | BAC | CH211-137G12 | ZFIN Curated Data | |
| Contained in | BAC | DKEY-164N2 | ZFIN Curated Data | |
| Contained in | BAC | RP71-1C3 | ZFIN Curated Data | |
| Contained in | Fosmid | CH1073-452I7 | ZFIN Curated Data | |
| Encodes | EST | IMAGE:7143158 | Thisse et al., 2004 |
1 - 7 of 7
Show
| Type | Accession # | Sequence | Length (nt/aa) | Analysis |
|---|---|---|---|---|
| RNA | RefSeq:XM_688741 (1) | 11517 nt | ||
| Genomic | GenBank:AL732499 (2) | 161104 nt | ||
| Polypeptide | UniProtKB:A0A8N7UT85 (1) | 3604 aa |
- Bayés, À., Collins, M.O., Reig-Viader, R., Gou, G., Goulding, D., Izquierdo, A., Choudhary, J.S., Emes, R.D., Grant, S.G. (2017) Evolution of complexity in the zebrafish synapse proteome. Nature communications. 8:14613
- Elkon, R., Milon, B., Morrison, L., Shah, M., Vijayakumar, S., Racherla, M., Leitch, C.C., Silipino, L., Hadi, S., Weiss-Gayet, M., Barras, E., Schmid, C.D., Ait-Lounis, A., Barnes, A., Song, Y., Eisenman, D.J., Eliyahu, E., Frolenkov, G.I., Strome, S.E., Durand, B., Zaghloul, N.A., Jones, S.M., Reith, W., Hertzano, R. (2015) RFX transcription factors are essential for hearing in mice. Nature communications. 6:8549
1 - 2 of 2
Show