ZFIN ID: ZDB-GENE-030520-1
Gene Name: troponin T2c, cardiac
Gene Symbol: tnnt2c
Sequence Ontology ID : SO:0000704

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Previous Names: tnnt1, cb328 (1), sb:cb328, zgc:86847

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(Including Attributions)
Location: Chr: 4 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 24 figures from 5 publications
Directly Submitted Expression Data: 6 figures (12 images) from Thisse et al., 2005 [eu913]
  6 figures (10 images) from Thisse et al., 2001 [cb328]
  8 figures (10 images) from Rauch et al., 2003 [cegs953]
Wild-type Stages, Structures: Gastrula:Bud (10.0h-10.33h) to Juvenile:Days 45-89 (45d-90d, 14 mm, 12 teeth)
  adaxial cell, fast muscle cell, hypaxial myotome region, medial migration pathway mesenchyme (all 13) expand
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa224 Point Mutation Unknown Premature Stop ENU
Targeting reagents: MO1-tnnt2c (1)
PHENOTYPE
Data: 4 figures from Ferrante et al., 2011
Observed in: muscle cell myofibril, sarcomere organization, slow muscle cell filamentous actin, slow muscle cell myofibril (all 7) expand
DISEASE ASSOCIATED WITH tnnt2c HUMAN ORTHOLOGNo data available
GENE ONTOLOGY
Ontology GO Term
Biological Process sarcomere organization (more)
Cellular Component troponin complex (more)
GO Terms (all 3)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001978
  • InterPro:IPR027707
  • Pfam:PF00992
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA tnnt2c-001 (1) 1909
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM tnnt2c No data available
    MARKER RELATIONSHIPS
    tnnt2cContained in: [BAC] DKEY-222F8 (1) (order this)
    tnnt2cEncodes: [EST] cb328 (1) (order this), cegs953 (1) (order this), eu913 (1)
    [cDNA] MGC:86847 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_181499 (1) 1917bp
    Genomic GenBank:BX005210 (1) 207949bp Blast at MegaBLAST
    Polypeptide UniProtKB:Q8AVB1 290aa
    Sequence Clusters UniGene:13906 (1)
    Sequence Information (all 17)
    OTHER tnnt2c GENE PAGES
  • Alliance (1)
  • Gene:353248 (1)
  • VEGA:OTTDARG00000007628 (1)
  • Ensembl(GRCz10):ENSDARG00000032242 (1)
  • ORTHOLOGY for tnnt2c (Chr: 4)
    CITATIONS (23)