ZFIN ID: ZDB-GENE-030408-5
Gene Name: BCAS2 pre-mRNA processing factor
Gene Symbol: bcas2    Nomenclature History

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Previous Names: cb302 (1), zgc:101730

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 8 Mapping Details/Browsers
Description: Predicted to be involved in mRNA splicing, via spliceosome. Predicted to localize to Prp19 complex and U2-type catalytic step 2 spliceosome. Is expressed in several structures, including alar plate midbrain region; blood; optic vesicle; solid lens vesicle; and ventral mesoderm. Human ortholog(s) of this gene implicated in breast cancer. Orthologous to human BCAS2 (BCAS2 pre-mRNA processing factor).
Genome Resources: Alliance (1),  Gene:493614 (1),  Ensembl(GRCz11):ENSDARG00000043631 (2)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Sequence Targeting Reagents
Targeting Reagent Created Alleles Publications
TALEN1-bcas2
1
PHENOTYPE No data available
DISEASE ASSOCIATED WITH bcas2 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH bcas2 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process mRNA splicing, via spliceosome (more)
Cellular Component nucleus (more)
Molecular Function molecular_function (more)
GO Terms (all 9)
PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA bcas2-201 (1)    Ensembl 1110
Browsers: UCSCNCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM bcas2 No data available
MARKER RELATIONSHIPS
bcas2 Contained in: [BAC] DKEYP-46C9 (1)
bcas2 Encodes: [EST] cb302 (1)
[cDNA] MGC:101730 (1)
SEQUENCE INFORMATION
Type Accession # Length (nt/aa) Analysis
RNA RefSeq:NM_001007774 (1) 1117 nt
Genomic GenBank:BX321886 (1) 168093 nt
Select Tool
Polypeptide UniProtKB:Q5RKQ0 (1) 225 aa
Sequence Information (all 10)
ORTHOLOGY for bcas2 ( Chr: 8 )
CITATIONS (26)