ZFIN ID: ZDB-GENE-030327-7
Gene Name: selenoprotein N, 1
Gene Symbol: sepn1

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Previous Names: sepn (1), cb686 (1), wu:fb06g01, wu:fb73d02, wu:fv41b08, zgc:101091

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(Including Attributions)
Location: Chr: 17 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 11 figures from 3 publications
Directly Submitted Expression Data: 6 figures (26 images) from Thisse et al., 2001 [cb686]
Wild-type Stages, Structures: Gastrula:50%-epiboly (5.25h-5.66h) to Hatching:Long-pec (48.0h-60.0h)
  adaxial cell, anterior axial hypoblast, axis, central nervous system (all 24) expand
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Targeting reagents: MO1-sepn1 (1), MO2-sepn1 (1), MO3-sepn1 (1), MO4-sepn1 (1), MO5-sepn1 (1) (all 6) expand
PHENOTYPE
Data: 9 figures from 2 publications
Observed in: heart, muscle cell sarcomere, myoseptum, myotome (all 11) expand
DISEASE ASSOCIATED WITH sepn1 HUMAN ORTHOLOG
Disease Ontology Term OMIM Term OMIM Phenotype ID
congenital fiber-type disproportion Myopathy, congenital, with fiber-type disproportion 255310
congenital muscular dystrophy Muscular dystrophy, rigid spine, 1 602771
GENE ONTOLOGY
Ontology GO Term
Biological Process calcium-mediated signaling (more)
Cellular Component endoplasmic reticulum (more)
Molecular Function oxidoreductase activity (more)
GO Terms (all 10)
PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
TRANSCRIPTS
Type Name Length (bp) Analysis
mRNA sepn1-001 (1) 2873
ncRNA sepn1-002 (1) 609
sepn1-003 (1) 513
GENE PRODUCT DESCRIPTION
INTERACTIONS AND PATHWAYSNo data available
ANTIBODIESNo data available
PLASMIDSNo data available
CONSTRUCTS WITH SEQUENCES FROM sepn1 No data available
SEGMENT (CLONE AND PROBE) RELATIONSHIPS
sepn1Contained in: [BAC] CH211-15D5 (1) (order this), CH211-247C16 (order this)
sepn1Encodes: [EST] cb686 (1) (order this), fb06g01, fb73d02, fv41b08
[cDNA] MGC:101091 (order this), MGC:174730 (1) (order this)
SEQUENCE INFORMATION
Type Accession # Length (bp/aa) Analysis
RNA RefSeq:NM_001004294 (1) 2896bp
Genomic GenBank:CR626962 (1) 117015bp
Select Tool
Polypeptide UniProtKB:E7FD15 (1) 557aa
Sequence Clusters UniGene:155973 (1)
Sequence Information (all 36)
OTHER sepn1 GENE PAGES
  • Gene:352914 (1)
  • VEGA:OTTDARG00000028713 (1)
  • Ensembl(GRCz10):ENSDARG00000033616 (1)
  • ORTHOLOGY for sepn1 (Chr: 17)
    Species Symbol Chromosome Accession # Evidence
    Human SEPN1 1
  • Gene:57190
  • OMIM:606210
  • HGNC:15999
  • Amino acid sequence comparison (2)
    Conserved genome location (synteny) (3)
    Mouse Sepn1 4
  • MGI:2151208
  • Gene:74777
  • Amino acid sequence comparison (1)
    Download Curated Orthology
    CITATIONS (23)