ZFIN ID: ZDB-GENE-030327-6
Gene Name: selenoprotein T, 1a
Gene Symbol: selenot1a    Nomenclature History

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Previous Names: selt1a (1), sept1a (1), cb700 (1), wu:fb63h09, wu:fc79a12

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 2 Mapping Details/Browsers
Description: Predicted to have thioredoxin-disulfide reductase activity. Predicted to be involved in oxidation-reduction process. Predicted to localize to the endoplasmic reticulum; endoplasmic reticulum membrane; and integral component of membrane. Is expressed in several structures, including alar plate midbrain region; axis; digestive system; mesoderm; and sensory system. Orthologous to human SELENOT (selenoprotein T).
Genome Resources: Alliance (1),  Gene:352919 (1),  Ensembl(GRCz11):ENSDARG00000058354 (2)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa31258 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH selenot1a HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH selenot1a VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process oxidation-reduction process (more)
    Cellular Component endoplasmic reticulum (more)
    Molecular Function oxidoreductase activity (more)
    GO Terms (all 7)
    PROTEIN FAMILIES, DOMAINS AND SITES
    Type InterPro ID Name
    Family IPR011893 Selenoprotein, Rdx-type
    Family IPR019389 Selenoprotein T
    Homologous_superfamily IPR036249 Thioredoxin-like superfamily
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA selenot1a-201 (1)    Ensembl 1301
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM selenot1a No data available
    MARKER RELATIONSHIPS
    selenot1a Contained in: [Fosmid] CH1073-20K7 (1)
    selenot1a Encodes: [EST] cb700 (1) (order this), fb63h09, fc79a12
    [cDNA] MGC:63945 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_178290 (1) 766 bp
    Genomic GenBank:CU633992 (1) 39137 bp
    Select Tool
    Polypeptide UniProtKB:Q802F2 (1) 193 aa
    Sequence Information (all 28)
    ORTHOLOGY for selenot1a ( Chr: 2 )
    CITATIONS (29)