ZFIN ID: ZDB-GENE-030219-104
Gene Name: transcription factor Dp-2
Gene Symbol: tfdp2    Nomenclature History

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Previous Names: id:ibd2511 (1), wu:fb94f09 (1), zgc:110490

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 15 Mapping Details/Browsers
Description: Predicted to have several functions, including DNA-binding transcription factor activity; transcription coregulator activity; and transcription factor binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to localize to nucleus. Is expressed in brain and spinal cord. Orthologous to human TFDP2 (transcription factor Dp-2).
Genome Resources: Alliance (1),  Gene:338204 (1),  Ensembl(GRCz11):ENSDARG00000042835 (2)
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (2 images) from Kudoh et al., 2001 [ibd2511]
  1 figure (1 image) from Thisse et al., 2004 [IMAGE:7154724]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
High Throughput Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la012787Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • la019438Tg Transgenic Insertion Unknown Unknown DNA
    la019442Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa6362 Point Mutation Unknown Splice Site ENU
    sa19100 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH tfdp2 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH tfdp2 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process mitotic cell cycle (more)
    Cellular Component nucleus (more)
    Molecular Function DNA binding (more)
    GO Terms (all 10)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA tfdp2-201 (1)    Ensembl 1056
    tfdp2-204 (1)    Ensembl 2100
    ncRNA tfdp2-002 (1)    Ensembl 577
    tfdp2-003 (1)    Ensembl 765
    tfdp2-004 (1)    Ensembl 1182
    tfdp2-005 (1)    Ensembl 1225
    tfdp2-007 (1)    Ensembl 776
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM tfdp2 No data available
    MARKER RELATIONSHIPS
    tfdp2 Contained in: [BAC] CH73-119D14 (1), CH73-359O16 (1), CH211-117A13 (1)
    tfdp2 Encodes: [EST] fb94f09 (1), ibd2511, IMAGE:7154724 (1)
    [cDNA] MGC:110490 (1), MGC:173968 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_198208 (1) 2022 nt
    Genomic GenBank:CU467614 (1) 175198 nt
    Select Tool
    Polypeptide UniProtKB:Q6TNQ1 (1) 409 aa
    Sequence Information (all 28)
    ORTHOLOGY for tfdp2 ( Chr: 15 )
    CITATIONS (32)