ZFIN ID: ZDB-GENE-030131-9895
Gene Name: zinc finger protein 513a
Gene Symbol: znf513a    Nomenclature History

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Previous Names: cb557 (1), znf513, fi87d06, sb:cb557 (1), si:ch211-101l18.1, si:ch211-278j3.2, wu:fi87d06

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 20 Mapping Details/Browsers
Description: Predicted to have metal ion binding activity and nucleic acid binding activity. Involved in retina development in camera-type eye. Predicted to localize to nucleus. Is expressed in hindbrain; spinal cord; and telencephalon. Human ortholog(s) of this gene implicated in retinitis pigmentosa 58. Orthologous to human ZNF513 (zinc finger protein 513).
Genome Resources: Alliance (1),  Gene:568216 (1),  Ensembl(GRCz11):ENSDARG00000019961 (2)
GENE EXPRESSION
Directly Submitted Expression Data: 4 figures (7 images) from Thisse et al., 2001 [cb557]
Wild-type Stages, Structures: Segmentation:20-25 somites (19.0h-22.0h) to Hatching:Long-pec (48.0h-60.0h)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa15908 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa43410 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa45692 Point Mutation Unknown Splice Site ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    MO1-znf513a N/A 1
    DISEASE ASSOCIATED WITH znf513a HUMAN ORTHOLOG
    Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
    retinitis pigmentosa 58 Alliance ?Retinitis pigmentosa 58 613617
    DISEASE ASSOCIATED WITH znf513a VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process retina development in camera-type eye (more)
    Cellular Component nucleus (more)
    Molecular Function metal ion binding (more)
    GO Terms (all 5)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA znf513a-201 (1)    Ensembl 3345
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM znf513a No data available
    MARKER RELATIONSHIPS
    znf513a Contained in: [BAC] CH211-101L18, CH211-278J3
    [Fosmid] ZFOS-1375G1 (1)
    znf513a Encodes: [EST] cb557 (1) (order this), fi87d06
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001309467 (1)
    Genomic GenBank:BX276101 (1) 167149 nt
    Select Tool
    Polypeptide UniProtKB:R4GDS0 (1) 548 aa
    Sequence Information (all 18)
    ORTHOLOGY for znf513a ( Chr: 20 )
    CITATIONS (22)