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ZIRC
ZFIN ID: ZDB-GENE-030131-9834
Gene Name: protein tyrosine phosphatase receptor type K
Gene Symbol: ptprk
Sequence Ontology ID : SO:0000704

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Previous Names: cb424 (1), sb:cb424, si:dkey-126h10.3, wu:fa06f08

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(Including Attributions)
Location: Chr: 20 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have protein tyrosine phosphatase activity. Predicted to be involved in protein dephosphorylation. Predicted to localize to the integral component of membrane. Orthologous to human PTPRK  ...
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa17812 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • umc14 Small Deletion Exon 6 Unknown CRISPR
    umc15 Small Deletion Exon 6 Unknown CRISPR
    Targeting reagents:
    PHENOTYPE
    Data: Fig. S8 from Casar et al., 2018
    Observed in:
    DISEASE ASSOCIATED WITH ptprk HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH ptprk VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process dephosphorylation (more)
    Cellular Component integral component of membrane (more)
    Molecular Function hydrolase activity (more)
    GO Terms (all 8)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    ncRNA ptprk-002 (1) 845
    mRNA ptprk-201 (1) 4547
    ptprk-202 (1) 3595
    ptprk-203 (1) 604
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM ptprk No data available
    MARKER RELATIONSHIPS
    ptprkContained in: [BAC] CH211-205N18 (1) (order this)
    [Fosmid] CH1073-36F4 (1) (order this)
    ptprkEncodes: [EST] cb424 (1) (order this), fa06f08
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:XM_021468564 (1)
    Genomic GenBank:AL954182 (1) 152215bp
    Select Tool
    Polypeptide UniProtKB:A0A345M3N7 (1) 1443aa
    Sequence Clusters UniGene:11940 (1)
    Sequence Information (all 71)
    ORTHOLOGY for ptprk (Chr: 20)
    CITATIONS (23)