ZFIN ID: ZDB-GENE-030131-9823
Gene Name: laminin, alpha 5
Gene Symbol: lama5
Sequence Ontology ID : SO:0000704

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Previous Names: fra (1), cb402 (1), fransen (1), im:7138247, sb:cb402, unm m538, wu:fb81a10

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(Including Attributions)
Location: Chr: 23 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 31 figures from 10 publications
Directly Submitted Expression Data: 6 figures (39 images) from Thisse et al., 2001 [cb402]
  6 figures (10 images) from Thisse et al., 2004 [IMAGE:7138247]
  12 figures (28 images) from Rauch et al., 2003 [fb81a10]
Wild-type Stages, Structures: Cleavage:2-cell (0.75h-1.0h) to Larval:Day 5 (120.0h-144.0h, 3.9mm, 6 teeth)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la022827Tg Transgenic Insertion Unknown Unknown DNA
la022828Tg Transgenic Insertion Unknown Unknown DNA
m538 Point Mutation Exon 59 Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa6725 Point Mutation Unknown Premature Stop ENU
    sa9446 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa9662 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa13881 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa16078 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa16193 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa16872 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa18231 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa18267 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa24259 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa24260 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa25193 Point Mutation Unknown Splice Site ENU
    sa29878 Point Mutation Unknown Splice Site ENU
    sa37625 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa43917 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa43918 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa43919 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • tc17 Unknown Unknown Unknown ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • tk219a Unknown Unknown Unknown ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • tm55 Unknown Unknown Unknown ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • tr206b Unknown Unknown Unknown ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Targeting reagents:
    PHENOTYPE
    Data: 18 figures from 6 publications
    Observed in:
    DISEASE ASSOCIATED WITH lama5 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH lama5 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process cell-cell adhesion (more)
    Molecular Function signaling receptor binding (more)
    GO Terms (all 11)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000034 (1)
  • InterPro:IPR000742 (1)
  • InterPro:IPR001791 (1)
  • InterPro:IPR002049 (1)
  • InterPro:IPR008211 (1)
  • InterPro:IPR009254 (1)
  • InterPro:IPR010307 (1)
  • InterPro:IPR013032 (1)
  • InterPro:IPR013320 (1)
  • InterPro:IPR038684 (1)
  • PROSITE:PS00022 (1)
  • PROSITE:PS01248 (1)
  • PROSITE:PS50025 (1)
  • PROSITE:PS50026 (1)
  • PROSITE:PS50027 (1)
  • PROSITE:PS51115 (1)
  • PROSITE:PS51117 (1)
  • Pfam:PF00052 (1)
  • Pfam:PF00053 (1)
  • Pfam:PF00055 (1)
  • Pfam:PF02210 (1)
  • Pfam:PF06008 (1)
  • Pfam:PF06009 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA lama5-001 (1) 11542
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM lama5 No data available
    MARKER RELATIONSHIPS
    lama5Contained in: [BAC] CH73-78G5 (1) (order this), DKEY-14P11 (1) (order this), DKEY-204F1 (1) (order this)
    lama5Encodes: [EST] cb402 (1) (order this), fb81a10 (1) (order this), IMAGE:7138247 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001039171 (1) 11565bp
    Genomic GenBank:BX470099 (1) 199831bp
    Select Tool
    Polypeptide UniProtKB:D7PSA0 (1) 3664aa
    Sequence Clusters UniGene:12091 (1)
    Sequence Information (all 25)
    OTHER lama5 GENE PAGES
  • Alliance (1)
  • Gene:321243 (1)
  • VEGA:OTTDARG00000021187 (1)
  • Ensembl(GRCz11):ENSDARG00000058543 (2)
  • ORTHOLOGY for lama5 (Chr: 23)
    CITATIONS (45)