ZFIN ID: ZDB-GENE-030131-9704
Gene Name: cartilage acidic protein 1a
Gene Symbol: crtac1a    Nomenclature History

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Previous Names: crtac1, cb184 (1), sb:cb184, zgc:165343

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 1 Mapping Details/Browsers
Description: Is expressed in floor plate. Orthologous to human CRTAC1 (cartilage acidic protein 1).
Genome Resources: Alliance (1),  Gene:559626 (1),  Ensembl(GRCz11):ENSDARG00000059826 (2)
GENE EXPRESSION
Directly Submitted Expression Data: 3 figures (4 images) from Thisse et al., 2001 [cb184]
Wild-type Stages, Structures: Pharyngula:Prim-15 (30.0h-36.0h) to Hatching:Long-pec (48.0h-60.0h)
 
High Throughput Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa25687 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH crtac1a HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH crtac1a VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY No data available
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA crtac1a-201 (1)    Ensembl 2103
    crtac1a-203 (1)    Ensembl 515
    ncRNA crtac1a-002 (1)    Ensembl 836
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM crtac1a No data available
    MARKER RELATIONSHIPS
    crtac1a Contained in: [BAC] CH211-196H16 (1)
    crtac1a Encodes: [EST] cb184 (1) (order this)
    [cDNA] MGC:165343 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001080178 (1) 1798 nt
    Genomic GenBank:AL929150 (1) 229480 nt Blast at MegaBLAST
    Polypeptide UniProtKB:A1XF92 (1) 546 aa
    Sequence Information (all 21)
    ORTHOLOGY for crtac1a ( Chr: 1 )
    CITATIONS (17)