ZFIN ID: ZDB-GENE-030131-9385
Gene Name: smg9 nonsense mediated mRNA decay factor
Gene Symbol: smg9
Sequence Ontology ID : SO:0000704

{{control.fieldName}} Edit

ID: {{control.nomenID}}
{{control.fieldName}}:
Reason:
Comments:

Attributions

{{pub.zdbID}}
Previous Names: fj67f05, si:dkey-79d12.3, wu:fj67f05 (1)

Add new Alias

Alias
Attribution

Attributions for Alias: {{control.newAlias}}

{{pub.zdbID}}

Delete Alias:

(Including Attributions)
Location: Chr: 16 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION No data available
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa2858 Point Mutation Unknown Splice Site ENU
sa36124 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH smg9 HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    Heart and brain malformation syndrome 616920
    DISEASE ASSOCIATED WITH smg9 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process nuclear-transcribed mRNA catabolic process, nonsense-mediated decay (more)
    GO Terms (all 1)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR019354 (1)
  • InterPro:IPR027417 (1)
  • InterPro:IPR039177 (1)
  • Pfam:PF10220 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA smg9-001 (1) 2342
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM smg9 No data available
    MARKER RELATIONSHIPS
    smg9Contained in: [BAC] DKEY-79D12 (1) (order this)
    smg9Encodes: [EST] fj67f05
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:XM_001923780 (1) 2354bp
    Genomic GenBank:BX005256 (1) 199468bp
    Select Tool
    Polypeptide UniProtKB:E7F7F6 (1) 505aa
    Sequence Clusters UniGene:77690 (1)
    Sequence Information (all 9)
    OTHER smg9 GENE PAGES
  • Alliance (1)
  • Gene:562557 (1)
  • VEGA:OTTDARG00000034347 (1)
  • Ensembl(GRCz11):ENSDARG00000076627 (2)
  • ORTHOLOGY for smg9 (Chr: 16)
    CITATIONS (11)