ZFIN ID: ZDB-GENE-030131-9056
Gene Name: ADP-ribosylation factor 6b
Gene Symbol: arf6b    Nomenclature History

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Previous Names: wu:fa98a01 (1), zgc:172028

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 17 Mapping Details/Browsers
Description: Predicted to have GTP binding activity and GTPase activity. Involved in epiboly involved in gastrulation with mouth forming second and intrahepatic bile duct development. Is expressed in intestinal bulb; liver; and pancreas. Orthologous to human ARF6 (ADP ribosylation factor 6).
Genome Resources: Alliance (1),  Gene:100003206 (1),  Ensembl(GRCz11):ENSDARG00000052928 (2)
GENE EXPRESSION
All Expression Data: Fig. 2 from Ningappa et al., 2015
Wild-type Stages, Structures: Larval:Protruding-mouth (72.0h-96.0h, 3.5mm) to Larval:Day 4 (96.0h-120.0h)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Sequence Targeting Reagents
Targeting Reagent Created Alleles Publications
MO1-arf6a,arf6b N/A 2
MO1-arf6b N/A 1
MO2-arf6b N/A 1
DISEASE ASSOCIATED WITH arf6b HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH arf6b VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process epiboly involved in gastrulation with mouth forming second (more)
Molecular Function GTPase activity (more)
GO Terms (all 5)
PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA arf6b-202 (1)    Ensembl 2312
Browsers: UCSCNCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM arf6b No data available
MARKER RELATIONSHIPS
arf6b Contained in: [BAC] CH211-184P2 (1)
arf6b Encodes: [EST] fa98a01
[cDNA] MGC:172028 (1)
SEQUENCE INFORMATION
Type Accession # Length (nt/aa) Analysis
RNA RefSeq:NM_001161375 (1)
Genomic GenBank:CT027758 (1) 133689 nt
Select Tool
Polypeptide UniProtKB:Q561S8 (1) 160 aa
Sequence Information (all 11)
ORTHOLOGY for arf6b ( Chr: 17 )
CITATIONS (18)