ZFIN ID: ZDB-GENE-030131-8720
Gene Name: pentraxin 3, long a
Gene Symbol: ptx3a
Sequence Ontology ID : SO:0000704

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Previous Names: fb05a06, sb:eu1077, si:ch211-272f3.3, wu:fb05a06

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(Including Attributions)
Location: Chr: 18 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 8 figures from 2 publications
Directly Submitted Expression Data: 7 figures (21 images) from Thisse et al., 2005 [eu1077]
Wild-type Stages, Structures: Segmentation:14-19 somites (16.0h-19.0h) to Larval:Day 5 (120.0h-144.0h, 3.9mm, 6 teeth)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa17589 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH ptx3a HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH ptx3a VIA EXPERIMENTAL MODELS No data available
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001759 (1)
  • InterPro:IPR013320 (1)
  • InterPro:IPR030476 (1)
  • PROSITE:PS00289 (1)
  • PROSITE:PS51828 (1)
  • Pfam:PF00354 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA ptx3a-001 (1) 2164
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM ptx3a No data available
    MARKER RELATIONSHIPS
    ptx3aContained in: [BAC] CH211-232P17 (1) (order this), CH211-272F3 (1) (order this)
    ptx3aEncodes: [EST] eu1077 (1), fb05a06, fb04g11 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:XM_005159231 (1)
    Genomic GenBank:BX255879 173755bp
    Select Tool
    Polypeptide UniProtKB:A3KPN4 (1) 447aa
    Sequence Clusters UniGene:76284 (1)
    Sequence Information (all 19)
    OTHER ptx3a GENE PAGES
  • Alliance (1)
  • Gene:101887125 (1)
  • VEGA:OTTDARG00000013483 (1)
  • Ensembl(GRCz11):ENSDARG00000068275 (2)
  • ORTHOLOGY for ptx3a (Chr: 18)
    CITATIONS (17)