ZFIN Gene: si:dkey-250d21.1

ZFIN ID: ZDB-GENE-030131-8276

ZFIN ID: ZDB-GENE-030131-8276

Gene Name:

si:dkey-250d21.1

Gene Symbol:

si:dkey-250d21.1

Sequence Ontology ID :

SO:0001217

Previous Names:

fj64b09, wu:fj64b09 (1)

Location:

Chr: 10 Mapping Details/Browsers

Nomenclature History

AUTOMATED DESCRIPTION

Predicted to have DNA binding activity and metal ion binding activity. Orthologous to human THAP12 (THAP domain containing 12).

Nomenclature Note: This gene is derived from the zebrafish genome sequencing and annotation project. When more is known about the gene, the current nomenclature will be replaced with more traditional zebrafish gene nomenclature. The prefix 'si:' indicates that this gene is represented by annotated genomic sequence from the Sanger Institute.

GENE EXPRESSION
Curated Microarray Expression:	GEO (1)

MUTATIONS AND SEQUENCE TARGETING REAGENTS

Allele	Type	Localization	Consequence	Mutagen	Suppliers
sa14340	Point Mutation	Unknown	Premature Stop	ENU	European Zebrafish Resource Center (EZRC) (order this) Zebrafish International Resource Center (ZIRC) (order this)
sa34937	Point Mutation	Unknown	Unknown	ENU	Zebrafish International Resource Center (ZIRC) (order this)
sa44727	Point Mutation	Unknown	Unknown	ENU

PHENOTYPE No data available

DISEASE ASSOCIATED WITH si:dkey-250d21.1 HUMAN ORTHOLOG No data available

DISEASE ASSOCIATED WITH si:dkey-250d21.1 VIA EXPERIMENTAL MODELS No data available

GENE ONTOLOGY

Ontology	GO Term
Molecular Function	DNA binding (more)

GO Terms (all 3)

PROTEIN FAMILIES, DOMAINS AND SITES
InterPro:IPR006612 (1) InterPro:IPR038441 (1)	PROSITE:PS50950 (1)	Pfam:PF05485 (1)

TRANSCRIPTS
Type	Name	Length (bp)	Analysis
mRNA	si:dkey-250d21.1-201 (1)	2338	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

GENE PRODUCT DESCRIPTION No description available

INTERACTIONS AND PATHWAYS

ANTIBODIES No data available

PLASMIDS No data available

CONSTRUCTS WITH SEQUENCES FROM si:dkey-250d21.1 No data available

MARKER RELATIONSHIPS

si:dkey-250d21.1 Contained in:	[BAC] CH211-266I6 (1) (order this), DKEY-250D21 (1) (order this)
si:dkey-250d21.1 Encodes:	[EST] fj64b09

SEQUENCE INFORMATION

Type	Accession #	Length (bp/aa)	Analysis
RNA	RefSeq:XM_002663575 (1)		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl UCSC BLAT
Genomic	GenBank:AL953904 (1)	166088 bp	Select Tool MegaBLAST Ensembl
Polypeptide	UniProtKB:F1QRG5 (1)	723 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
Sequence Clusters	UniGene:106845 (1)

Sequence Information (all 21)

OTHER si:dkey-250d21.1 GENE PAGES

Alliance (1)

Gene:402835 (1)

VEGA:OTTDARG00000031115 (1)

Ensembl(GRCz11):ENSDARG00000042492 (2)

ORTHOLOGY for si:dkey-250d21.1 ( Chr: 10 )

CITATIONS (16)

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