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ZIRC
ZFIN ID: ZDB-GENE-030131-8276
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Gene Name: si:dkey-250d21.1
Gene Symbol: si:dkey-250d21.1    Nomenclature History

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Previous Names: fj64b09, wu:fj64b09 (1)

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 10 Mapping Details/Browsers
Description: Predicted to have DNA binding activity and metal ion binding activity. Orthologous to human THAP12 (THAP domain containing 12).
Genome Resources: Alliance (1),  Gene:402835 (1),  Ensembl(GRCz11):ENSDARG00000042492 (2)

Nomenclature Note: This gene is derived from the zebrafish genome sequencing and annotation project. When more is known about the gene, the current nomenclature will be replaced with more traditional zebrafish gene nomenclature. The prefix 'si:' indicates that this gene is represented by annotated genomic sequence from the Sanger Institute.

GENE EXPRESSION
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa14340 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
    • sa34937 Point Mutation Unknown Unknown ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
    • sa44727 Point Mutation Unknown Unknown ENU
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH si:dkey-250d21.1 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH si:dkey-250d21.1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Molecular Function DNA binding (more)
    GO Terms (all 3)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR006612 (1)
  • InterPro:IPR038441 (1)
  • PROSITE:PS50950 (1)
  • Pfam:PF05485 (1)
    • TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA si:dkey-250d21.1-201 (1)    Ensembl 2338
    Select Tool
    Browsers: NCBI,  Ensembl,  ZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM si:dkey-250d21.1 No data available
    MARKER RELATIONSHIPS
    si:dkey-250d21.1 Contained in: [BAC] CH211-266I6 (1) (order this), DKEY-250D21 (1) (order this)
    si:dkey-250d21.1 Encodes: [EST] fj64b09
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:XM_002663575 (1)
    Select Tool
    Genomic GenBank:AL953904 (1) 166088 bp
    Select Tool
    Polypeptide UniProtKB:F1QRG5 (1) 723 aa
    Select Tool
    Sequence Clusters UniGene:106845 (1)
    Sequence Information (all 21)
    ORTHOLOGY for si:dkey-250d21.1 ( Chr: 10 )
    CITATIONS (16)