ZFIN ID: ZDB-GENE-030131-7928
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Gene Name: ribophorin II
Gene Symbol: rpn2
Sequence Ontology ID : SO:0000704

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Previous Names: fb95d11, fj62b10, wu:fb61f08 (1), wu:fb74e07, wu:fb95d11, wu:fj41f11, wu:fj62b10

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(Including Attributions)
Location: Chr: 11 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:56291]
  1 figure (1 image) from Thisse et al., 2004 [IMAGE:6908674]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
hi3583Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
    • la010031Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
    • la017695Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
    • PHENOTYPE
    Data: 2 figures from 2 publications
    Observed in:
    DISEASE ASSOCIATED WITH rpn2 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH rpn2 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process protein N-linked glycosylation (more)
    Cellular Component integral component of membrane (more)
    Molecular Function CONTRIBUTES_TO dolichyl-diphosphooligosaccharide-protein glycotransferase activity (more)
    GO Terms (all 5)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR008814 (1)
    		•
  • Pfam:PF05817 (1)
    		•
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA rpn2-001 (1) 1936
    Select Tool
    rpn2-002 (1) 839
    Select Tool
    rpn2-003 (1) 783
    Select Tool
    rpn2-004 (1) 722
    Select Tool
    rpn2-005 (1) 537
    Select Tool
    ncRNA rpn2-006 (1) 856
    Select Tool
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM rpn2 No data available
    MARKER RELATIONSHIPS
    rpn2Contained in: [BAC] CH73-223I23 (1) (order this)
    [Fosmid] CH1073-287G6 (1) (order this), ZFOS-1403H8 (1)
    rpn2Encodes: [EST] fb61f08, fb74e07, fb95d11, fj41f11, fj62b10, IMAGE:6908674 (1) (order this)
    [cDNA] MGC:56291 (1) (order this), MGC:76873 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_212748 (1) 2381bp
    Select Tool
    Genomic GenBank:CU929092 (1) 88958bp
    Select Tool
    Polypeptide UniProtKB:A0A2R8Q108 (1) 643aa
    Select Tool
    Sequence Clusters UniGene:121129 (1)
    Sequence Information (all 37)
    OTHER rpn2 GENE PAGES
  • Alliance (1)
  • Gene:335985 (1)
  • VEGA:OTTDARG00000035340 (1)
  • Ensembl(GRCz11):ENSDARG00000009724 (2)
    • ORTHOLOGY for rpn2 (Chr: 11)
    CITATIONS (28)