ZFIN ID: ZDB-GENE-030131-7742
Gene Name: superoxide dismutase 2, mitochondrial
Gene Symbol: sod2
Sequence Ontology ID : SO:0000704

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Previous Names: cb463 (1), Mn-SOD (1), sod(Mn) (1), wu:fj33b01

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(Including Attributions)
Location: Chr: 20 Mapping Details/Browsers
GENE EXPRESSION
All Expression Data: 17 figures from 12 publications
Directly Submitted Expression Data: 3 figures (6 images) from Thisse et al., 2001 [cb463]
Wild-type Stages, Structures: Cleavage:4-cell (1.0h-1.25h) to Adult (90d-730d, breeding adult)
  blood island, brain, common lymphoid progenitor, gill (all 19) expand
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa37068 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • European Zebrafish Resource Center (EZRC) (order this)
  • sa43471 Point Mutation Unknown Premature Stop ENU
    sa43472 Point Mutation Unknown Premature Stop ENU
    Targeting reagents: MO1-sod2 (1)
    PHENOTYPE
    Data: Fig. 4 from Peterman et al., 2014
    Observed in: blood island macrophage, blood island neutrophil, head macrophage, heart macrophage (all 5) expand
    DISEASE ASSOCIATED WITH sod2 HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    {Microvascular complications of diabetes 6} 612634
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process response to methylmercury (more)
    Molecular Function metal ion binding (more)
    GO Terms (all 10)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001189
  • InterPro:IPR019831
  • InterPro:IPR019832
  • InterPro:IPR019833
  • PROSITE:PS00088
  • Pfam:PF00081
  • Pfam:PF02777
  • EC:1.15.1.1
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA sod2-001 (1) 956
    ncRNA sod2-002 (1) 644
    sod2-003 (1) 982
    sod2-004 (1) 780
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM sod2 No data available
    MARKER RELATIONSHIPS
    sod2Contained in: [BAC] CH211-195E3 (1) (order this)
    sod2Encodes: [EST] cb463 (1), fj33b01
    [cDNA] MGC:73051 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_199976 (1) 979bp
    Genomic GenBank:AL929182 (1) 225515bp Blast at MegaBLAST
    Polypeptide UniProtKB:Q2TV65 224aa
    Sequence Clusters UniGene:6314 (1)
    Sequence Information (all 17)
    OTHER sod2 GENE PAGES
  • Gene:335799 (1)
  • VEGA:OTTDARG00000005559 (1)
  • Ensembl(GRCz10):ENSDARG00000042644 (1)
  • ORTHOLOGY for sod2 (Chr: 20)
    CITATIONS (82)