ZFIN ID: ZDB-GENE-030131-7742
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Gene Name: superoxide dismutase 2, mitochondrial
Gene Symbol: sod2
Sequence Ontology ID : SO:0000704

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Previous Names: cb463 (1), Mn-SOD (1), sod(Mn) (1), wu:fj33b01

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(Including Attributions)
Location: Chr: 20 Mapping Details/Browsers
GENE EXPRESSION
All Expression Data: 17 figures from 12 publications
Directly Submitted Expression Data: 3 figures (6 images) from Thisse et al., 2001 [cb463]
Wild-type Stages, Structures: Cleavage:4-cell (1.0h-1.25h) to Adult (90d-730d, breeding adult)
  blood island, brain, common lymphoid progenitor, gill (all 19) expand
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa37068 Point Mutation Unknown Premature Stop ENU
sa43471 Point Mutation Unknown Premature Stop ENU
sa43472 Point Mutation Unknown Premature Stop ENU
Targeting reagents: MO1-sod2 (1)
PHENOTYPE
Data: Fig. 4 from Peterman et al., 2014
Observed in: blood island macrophage, blood island neutrophil, head macrophage, heart macrophage (all 5) expand
DISEASE ASSOCIATED WITH sod2 HUMAN ORTHOLOG
Disease Ontology Term OMIM Term OMIM Phenotype ID
{Microvascular complications of diabetes 6} 612634
GENE ONTOLOGY
Ontology GO Term
Biological Process response to methylmercury (more)
Molecular Function metal ion binding (more)
GO Terms (all 10)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001189 (1)
  • InterPro:IPR019831 (1)
  • InterPro:IPR019832 (1)
  • InterPro:IPR019833 (1)
    		•
  • PROSITE:PS00088 (1)
    		•
  • Pfam:PF00081 (1)
  • Pfam:PF02777 (1)
    		•
  • EC:1.15.1.1 (1)
    		•
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA sod2-001 (1) 956
    Select Tool
    ncRNA sod2-002 (1) 644
    Select Tool
    sod2-003 (1) 982
    Select Tool
    sod2-004 (1) 780
    Select Tool
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM sod2 No data available
    MARKER RELATIONSHIPS
    sod2Contained in: [BAC] CH211-195E3 (1) (order this)
    sod2Encodes: [EST] cb463 (1), fj33b01
    [cDNA] MGC:73051 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_199976 (1) 979bp
    Select Tool
    Genomic GenBank:AL929182 (1) 225515bp Blast at MegaBLAST
    Polypeptide UniProtKB:Q2TV65 (1) 224aa
    Select Tool
    Sequence Clusters UniGene:6314 (1)
    Sequence Information (all 16)
    OTHER sod2 GENE PAGES
  • Gene:335799 (1)
  • VEGA:OTTDARG00000005559 (1)
  • Ensembl(GRCz10):ENSDARG00000042644 (1)
    • ORTHOLOGY for sod2 (Chr: 20)
    CITATIONS (83)