ZFIN ID: ZDB-GENE-030131-7677
Gene Name: nuclear factor, interleukin 3 regulated, member 5
Gene Symbol: nfil3-5
Sequence Ontology ID : SO:0000704

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Previous Names: e4bp4-5 (1), si:dkey-52h23.1, wu:fk63e10 (1)

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(Including Attributions)
Location: Chr: 6 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have proximal promoter DNA-binding activity transcription repressor activity, RNA polymerase II-specific; involved in circadian regulation of gene expression and regulation of  ...
GENE EXPRESSION
All Expression Data: 5 figures from 3 publications
Wild-type Stages, Structures: Pharyngula:Prim-5 (24.0h-30.0h) to Larval:Day 5 (120.0h-144.0h, 3.9mm, 6 teeth)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTSNo data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH nfil3-5 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH nfil3-5 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process circadian regulation of gene expression (more)
Cellular Component nucleus (more)
Molecular Function DNA-binding transcription factor activity (more)
GO Terms (all 5)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR004827 (1)
  • PROSITE:PS00036 (1)
  • PROSITE:PS50217 (1)
  • Pfam:PF07716 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA nfil3-5-201 (1) 4331
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM nfil3-5 No data available
    MARKER RELATIONSHIPS
    nfil3-5Contained in: [BAC] CH211-207J7 (1) (order this), DKEY-52H23 (1) (order this)
    nfil3-5Encodes: [EST] fk63e10
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001197058 (1)
    Genomic GenBank:BX601645 (1) 223513bp Blast at MegaBLAST
    Polypeptide UniProtKB:Q6P933 (1) 609aa
    Sequence Clusters UniGene:159745 (1)
    Sequence Information (all 19)
    OTHER nfil3-5 GENE PAGES
  • Alliance (1)
  • Gene:335737 (1)
  • VEGA:OTTDARG00000027193 (1)
  • ORTHOLOGY for nfil3-5 (Chr: 6)
    CITATIONS (18)