ZFIN ID: ZDB-GENE-030131-7464
Gene Name: outer dense fiber of sperm tails 3B
Gene Symbol: odf3b    Nomenclature History

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Previous Names: odf3l (1), fj19d04, shippo1 (1), shpp1 (1), shpp (1), si:dkeyp-1h4.4, trim35-30 (1), wu:fj19d04, zgc:63985

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 18 Mapping Details/Browsers
Description: Predicted to localize to cytoskeleton. Is expressed in peripheral olfactory organ and pronephros. Orthologous to human ODF3 (outer dense fiber of sperm tails 3) and ODF3B (outer dense fiber of sperm tails 3B).
Genome Resources: Alliance (1),  Gene:335524 (1),  Ensembl(GRCz11):ENSDARG00000042396 (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa45629 Point Mutation Unknown Splice Site ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH odf3b HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH odf3b VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process biological_process (more)
    Cellular Component cytoplasm (more)
    Molecular Function molecular_function (more)
    GO Terms (all 4)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA trim35-30-201 (1)    Ensembl 1298
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM odf3b No data available
    MARKER RELATIONSHIPS
    odf3b Contained in: [BAC] DKEY-238C7 (1) (order this), DKEYP-1H4 (1)
    odf3b Encodes: [EST] fj19d04
    [cDNA] MGC:63985 (1), MGC:191629 (1), MGC:195132 (1), MGC:195158 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_199958 (1) 1097 nt
    Genomic GenBank:BX571879 252198 nt Blast at MegaBLAST
    Polypeptide UniProtKB:A0A2R8QNI5 (1) 257 aa
    Sequence Information (all 30)
    ORTHOLOGY for odf3b ( Chr: 18 )
    CITATIONS (56)