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ZIRC
ZFIN ID: ZDB-GENE-030131-7464
Gene Name: outer dense fiber of sperm tails 3B
Gene Symbol: odf3b
Sequence Ontology ID : SO:0000704

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Previous Names: odf3l (1), fj19d04, shippo1 (1), shpp1 (1), shpp (1), si:dkeyp-1h4.4, trim35-30 (1), wu:fj19d04, zgc:63985

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(Including Attributions)
Location: Chr: 18 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to localize to the cytoplasm. Orthologous to several human genes including ODF3 (outer dense fiber of sperm tails 3).
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa45629 Point Mutation Unknown Splice Site ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH odf3b HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH odf3b VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process biological_process (more)
    Cellular Component cytoplasm (more)
    Molecular Function molecular_function (more)
    GO Terms (all 3)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR010736 (1)
  • Pfam:PF07004 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA trim35-30-201 (1) 1298
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM odf3b No data available
    MARKER RELATIONSHIPS
    odf3bContained in: [BAC] DKEY-238C7 (1) (order this), DKEYP-1H4 (1)
    odf3bEncodes: [EST] fj19d04
    [cDNA] MGC:63985 (1) (order this), MGC:191629 (1) (order this), MGC:195132 (1), MGC:195158 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_199958 (1) 1097bp
    Genomic GenBank:BX571879 252198bp Blast at MegaBLAST
    Polypeptide UniProtKB:A0A2R8QNI5 (1) 257aa
    Sequence Clusters UniGene:14748 (1)
    Sequence Information (all 31)
    ORTHOLOGY for odf3b (Chr: 18)
    CITATIONS (50)